Gene Information

Name : UMN179_00357 (UMN179_00357)
Accession : YP_004419291.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : putative lytic transglycosylase, catalytic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 357482 - 358174 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence :
ATGATTTTTAGATATGCAGTAATACTGATTGGTTTATTGGGATATAGTGTCTATAGTGCTGCCATTACGCATAATGTGCA
GCCTATACCGGGGATTTTCCATCGGGTTGCAAATCAGTATTCTGTGCCTGCATCAATGTTATATGCGATTGCATTGAATG
AAACTGGTCGCAGAGTAACAAACGTAAAGCAACCCTATCCGTGGTCGATTAATGTCAAAGGACGTAGTTATTTTTATCCC
TCTCAAATTAAAGCCTGCCAAGCATTACAGCAATTTATGTCTCGTTATCCGTTAAAAAATATTGATGTTGGTGTTGCTCA
GGTAAATTTGGGCTGGAACGGTATTAAGTATTTTCGGAGTGCTTGCGAGGGCTTTGATGTCGCAAAAAATTTAAATGCGG
CTGCACAAATTTTGAGAGATTGCTATGTTGAAAGAGGTGATTGGTTACACGCTTCGGGGTGTTATCATCATCCAAAAGGC
GGTTTTTATGCTGCCCGCTATATGCGTAATATCAAACAACACTTATCAATATTATCGTCTACTTCTTCCGTAACGCCAGA
TAACTGGACTTCACCGCCTGCGATTGCAGGTGTGAGTGTTGAAAGCGATCAGCGTCACTATCAATGGATTTTACCATCAC
AAACCATACAAACTGCTTTTATTTGGGTTGATCCAAACAAGGAGAGTCAATGA

Protein sequence :
MIFRYAVILIGLLGYSVYSAAITHNVQPIPGIFHRVANQYSVPASMLYAIALNETGRRVTNVKQPYPWSINVKGRSYFYP
SQIKACQALQQFMSRYPLKNIDVGVAQVNLGWNGIKYFRSACEGFDVAKNLNAAAQILRDCYVERGDWLHASGCYHHPKG
GFYAARYMRNIKQHLSILSSTSSVTPDNWTSPPAIAGVSVESDQRHYQWILPSQTIQTAFIWVDPNKESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 2e-32 44
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 1e-32 43
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 9e-33 43
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 4e-31 42
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 4e-31 42