Gene Information

Name : UMN179_00337 (UMN179_00337)
Accession : YP_004419271.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4372
EC number : -
Position : 345294 - 346751 bp
Length : 1458 bp
Strand : -
Note : -

DNA sequence :
ATGAAATTGAAGCAAAATGGCTTATTAAAAATTATTGTTCCCAGTGCGGTTGCTATTGCCGTGATCATTGGGCTTAAAGT
GTTTAAGTCGGAAGAAAATGCTACAGCACAAACACAACAGTATGCACTTTATGATCTTAAACCGGAAGAATTACGTGCAT
TAGGGATTGAGGGTGATACGCCACAAGATACCATTCGTACCTTAATCGGTACGATTAAGCGCGCAAGACAAGATATTGCA
GACGTAAAGGCACAAAACGAAGCATTAATGAAGAAGAACAAAACTCTCACAGATAAAAGTGAGAGTGTTGATGAGCAAAT
TCAAGCTGCATTAGCGCAAGAACGCAATGCGATGTCGATTGAATTTGAACAAGCATTACAGCAACGCACAGAAAGCCTAA
CAGAAGAGCTGGAAAAACGCCTTGCTAATCTGTCAGCATTGGAAAGTAAAGTTCAACCCAGCGAGACAAAAAAGGATGAT
GCCAATTTATTCGCAGCAGAATCCGGAAATGGTGAGGATTTTCCTATTGGTAATACTAGCGGCGGTATGCAATGGGTAAT
GCCGGCAGATATGCAGGCATTAGATCGTAACGGTAACCCTGTCACAGCCGGTCAGCAAGCAGAACAGTTCGGTTTTCCAA
GTCTATTTAGCGAATTGGATAAATCTGTATTAGGTAAGGCGCACGAAGACTTCACTGGCAAGAAAAAAGGAACATCAGCA
GAAGAGAAGCCTCCTGTGCCTATTTATACCTTGCCGGAAAACTCCACTTTAATTGGATCGGTCGCAATGACCGCGTTACT
GGGCCGTGTACCTATTGATGGTGTAGTAAATGATCCTTATCCGTTTAAAGTGCTTGTGGGAAAAGAGAATCTCACAGCTA
ACGGGATGATGTTACCGAACGTAGAAGGTGCAATTTTATCCGGAACGGCAAGCGGTGATTGGACGTTATCTTGTGTACGA
GGCAAGGTGATGAGTATCACATTGGTATTTAATGATGGCCGTGTTCGCACTTGGCCACAAAGCAAACGTAGTAGCAGTAG
CAGCAACAGCGATGGAATTGGTTGGATTTCAGATCCATACGGTGTGCCTTGCGTACCGGGGGACCGAAAAACCAATGCAC
CGGAATACCTCACTTCTAATTTCCTTTTAGGCGGTGTTGCCGCTGCAGCGGATGCTTATTCGCAAAGTCAAACAACGACC
GTGACGGATGGGGCAAGCGTGGTGAGTGCGGTAACGGGTGATCAAGGCAAATACTTGATGGGACAAGCGTTGGGAGCCGG
TTTAAAAGATACAACAGAGTGGTTAAGAAAACGGTTTGGACAAACATTTGACGCAATTTATGTACCGCCGGGTCATCCTG
TCGCTATTCATTTGACACAGTCTATTGATATTGATTATGAGCCAAATGGTCGAAAAGTGAACTACTTAAATAACAATCAA
CGCAAACAACTTGATTAA

Protein sequence :
MKLKQNGLLKIIVPSAVAIAVIIGLKVFKSEENATAQTQQYALYDLKPEELRALGIEGDTPQDTIRTLIGTIKRARQDIA
DVKAQNEALMKKNKTLTDKSESVDEQIQAALAQERNAMSIEFEQALQQRTESLTEELEKRLANLSALESKVQPSETKKDD
ANLFAAESGNGEDFPIGNTSGGMQWVMPADMQALDRNGNPVTAGQQAEQFGFPSLFSELDKSVLGKAHEDFTGKKKGTSA
EEKPPVPIYTLPENSTLIGSVAMTALLGRVPIDGVVNDPYPFKVLVGKENLTANGMMLPNVEGAILSGTASGDWTLSCVR
GKVMSITLVFNDGRVRTWPQSKRSSSSSNSDGIGWISDPYGVPCVPGDRKTNAPEYLTSNFLLGGVAAAADAYSQSQTTT
VTDGASVVSAVTGDQGKYLMGQALGAGLKDTTEWLRKRFGQTFDAIYVPPGHPVAIHLTQSIDIDYEPNGRKVNYLNNNQ
RKQLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03090 YP_005176208.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-92 45
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 3e-85 44
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 4e-81 43
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 2e-80 43
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 2e-85 42
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 5e-86 42
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 1e-80 41