Gene Information

Name : UMN179_00336 (UMN179_00336)
Accession : YP_004419270.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : conjugative transfer region lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 344880 - 345269 bp
Length : 390 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTGACGATTTTACTTGCTGCTGTGATGAGTTTAGCTGCTTGTTCTACCTCGCAAGAAAAGTTGTTGCCAAGAGG
TGATCAGACGATGTTGGACTTGTGGCAAAAGAAGAGTGGTAACGGTAATTTAATTCCGACACGACAGAATGTTGCTCAAG
ATCCAGTACGTGCGGTTAATTTTCAAGAACAAGAGAGTTATACCAGAACGGCAGAAAATGAGATCACTAATCTTTTCCCA
CGCTTACCAAATCCCGATTTGGTGATGTATATCTTTCCTCACCTCTCTGACACGGCTGAGCCAATGCCGGTTCCCGGATA
TAGCACGGTAATTCCGTTCTATAGCCGAGTACAGTATGCGCAAGCCGGCGAGCGTTTAGCGACTTATTAA

Protein sequence :
MSLTILLAAVMSLAACSTSQEKLLPRGDQTMLDLWQKKSGNGNLIPTRQNVAQDPVRAVNFQEQESYTRTAENEITNLFP
RLPNPDLVMYIFPHLSDTAEPMPVPGYSTVIPFYSRVQYAQAGERLATY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 3e-29 52
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-23 50
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-24 50
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 2e-25 50
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-28 49
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 4e-23 48
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-28 48
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 7e-23 48
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 4e-23 48
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 3e-25 47
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 3e-25 47
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 1e-21 45
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 8e-22 44