Gene Information

Name : UMN179_00323 (UMN179_00323)
Accession : YP_004419257.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 332569 - 333504 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATGCCTAAACTTTCTCTTATTACCACTTTTTTATTGTCATCTGCTGCAGGAAGCGCATTTGCGTTAAATACTGC
TCAAATAATGATGTCAAGTGCATCACCTAGCTGTGTTGAATATCGTGTTGTCGGAATCTGCTATTGGCTCTATTGTGGTT
GGGGTGGTTGCAGAGTACGAACCTCAACAAAAGTCCGTCACTACTTACCCGAACAAGTTGTATCAAGTTATAACCACGGC
GGACAAAACCCTTGGTCTGAAATGAATATGCTCGGGCAAGGTATTAAAGCTGGGCCAGAAAATGACCGTCCACAAACAAA
ACAATATTCCCAATTAACGTTTAAGAACGTCGATGTTATCGGTCATCCCGGTGGCGAAATTAATCGCGTATTAAGCTCAA
TGGGCTATTTTTGCAATACGCAAACGACAGCATTCAAGCCACACTTTTTAAGCGGACTGGATGTTATTGGGTGGCAAAAT
GGAATGCCGGAAGCGTTATATCCCGAAGCCTTAACACCCGGAATGCGTGAAGTTGGCAATCTTGGTGATATGTGGGGCAA
TATTTACCCTCGCGCCGGTGCCATCACTCAAGTGCATCCGTATAAAGCGGCTGCCGTTACAGCGCAACGCGCAGCCGATA
TCATTTCACGAACAGGACAACCTCACGTCTATTTGCCTGCTGCACAGAAAGCTAGACCTAGTCGCGGATACTGGCCTCCC
CCTCCAGTGGAAGAAGGCAAAATAAAAACACACAAATGGCAAATGCTCTATCCGAAGATGGAGCGCACCTGTGCAATTTT
TCCGGATAGAGATGCGTTAAACACTTACCAAGATAAATTATCGACACAACAAGATTACGCTTGGGCACTATGGCGACCGT
ATTCCTGTTGTAAACGCCGTGGGCAAACTTTCTTATACAGTACTGATTGGAACTAA

Protein sequence :
MKMPKLSLITTFLLSSAAGSAFALNTAQIMMSSASPSCVEYRVVGICYWLYCGWGGCRVRTSTKVRHYLPEQVVSSYNHG
GQNPWSEMNMLGQGIKAGPENDRPQTKQYSQLTFKNVDVIGHPGGEINRVLSSMGYFCNTQTTAFKPHFLSGLDVIGWQN
GMPEALYPEALTPGMREVGNLGDMWGNIYPRAGAITQVHPYKAAAVTAQRAADIISRTGQPHVYLPAAQKARPSRGYWPP
PPVEEGKIKTHKWQMLYPKMERTCAIFPDRDALNTYQDKLSTQQDYAWALWRPYSCCKRRGQTFLYSTDWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-90 63
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-69 53
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 4e-69 53
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-69 52
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-71 51
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-66 50
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 2e-68 50
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 4e-65 48
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 4e-65 48
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 2e-59 46
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 7e-61 46
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 6e-61 46
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-55 46
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 2e-48 45