Gene Information

Name : UMN179_00315 (UMN179_00315)
Accession : YP_004419249.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 322800 - 323738 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
ATGACACTGAAGAATAGTTTCTATGAGAGTTTATCTTTTGACGATTTACTTGAAAAATTCTTAATGATGAAATACTTGAG
ACCGGAAACTAAAAAAAGTTATAGAAAGATGGTATCACTTTTCACTCGATCATATCCGGGGATATTAGCAGATGAAATAA
CAAAAGAACTTGTTTGCAAATGGAGAAATGAGCAATTATCTAAACTTAGAGAAACATCTGTTAATAGTTACCTCCGAAAT
TGCAAAGCGGTGATCAATTGGGGAATTGAAAATAATTTAATCAATCGAATTGACAACCCCTTTTGCGGCACTTTTGTAAA
AGAGCCGCGAAAACAGAGAAAAATTATTACACAGAAGGATATAAATATACTTATTAAGTGTATCACACAAGAAGATGTCG
AAAAATTGTGTGGTAACGGTTATTGTACAATTGCTTTCGCGCAAGCCTTAATTTTTACGCTGTTATATACGGGAATGCGA
CGCAGTCAGCTTTTAAAATTAAAAATTCATAACATTGATCTGTCTAGCAGGACAATTTTTATCCCTCATAATATCAATAA
AAATAATGATGATCATATGATTCCAATATCATCAAAACTATATCCCTATCTTGCAGTCTTTCTGGATGAGCTTAAAATAA
GAAAAATACCAATTGATTCTCAGCTATTTAATATCAATATATTTTCATCAACCACGCGCAACAATGGCAATATGACAAAC
GATCAGTTAGCGCATTTTTTTCGAAAACTTTCCAAAATAACAAGGATAAAACTATCATCTCACAGGTTTAGGCATACGAT
TGCAACTCAACTAATGAGAAGTCCGGAGCAAAATTTGTATGCGGCGCAAAAACTATTAGGACACAGAGATATAAAAACTA
CATTAAGCTACATCGAATTCGATGTAGATATGTTGAGAAAAGTTGTAGATTCTATTTAG

Protein sequence :
MTLKNSFYESLSFDDLLEKFLMMKYLRPETKKSYRKMVSLFTRSYPGILADEITKELVCKWRNEQLSKLRETSVNSYLRN
CKAVINWGIENNLINRIDNPFCGTFVKEPRKQRKIITQKDINILIKCITQEDVEKLCGNGYCTIAFAQALIFTLLYTGMR
RSQLLKLKIHNIDLSSRTIFIPHNINKNNDDHMIPISSKLYPYLAVFLDELKIRKIPIDSQLFNINIFSSTTRNNGNMTN
DQLAHFFRKLSKITRIKLSSHRFRHTIATQLMRSPEQNLYAAQKLLGHRDIKTTLSYIEFDVDMLRKVVDSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02880 YP_005176187.1 tyrosine recombinase-2 family protein Not tested ICEPmu1 Protein 3e-42 43
Pmu_02700 YP_005176176.1 tyrosine recombinase-1 family protein Not tested ICEPmu1 Protein 1e-49 42