Gene Information

Name : UMN179_00287 (UMN179_00287)
Accession : YP_004419221.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : zinc/manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 291193 - 292071 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGATTCAGCTTCTTTGGTGGTTGATAATATTAGTGTGCGTTATAACAACGGACATACGGCGATTCAACAGATGTC
TTTTCGGCTTGAAGGTGGCACGATTTGCGCCCTAATTGGGGTAAACGGCAGTGGAAAATCAACACTGTTTAAAAGCATTA
TGGGGTTAATTACGCCACAACAAGGGCAGATTAGCTTATGTGGCGAAAGTGTGAAATTGGCACTGAAACAACATCTTGTC
GCTTATGTGCCGCAAAGTGAAGAGGTGGATTGGCAATTCCCGATTTCTGTTTACGATGTGGTGATGCAAGGACGTTATGC
CCATATGAATTTTTTGCGGATGGCAAAAGCGGCAGACAAAGCCGCCGTTGAGCAAGCGATGGCAAGAATGGATATTACCC
ATTTGAAAGATCGTCAAATCGGTGAGCTTTCCGGAGGTCAGAAAAAACGGGTGTTTTTAGCGAGAGCATTAGCTCAGCAA
AGCAAAATTATTTTGTTGGATGAGCCTTTTACCGGCGTTGATGTGCAGACGGAGGTGGCGATTATTGATCTGTTACAGCA
GTTACGTGAAGAAGGGCGTTTAATTTTGGTGTCAACGCATAATTTAGGTAGTGTGCCGGATTATTGTGATCAGGTGGTAA
TGATTAATCGAACTGTTATTGCCAGCGGTGCAACCGCAACCACTTTTACGCAAGAAAATCTGGAAAAAGTGTTCAGTGGT
GTGTTGCGTCATATCAAACTGCACGGTGAACATTTACACGAAGATGGCGATGAACGCGCGGTAACAGTGCTGACGGATGA
TGAAAAGGCAGCGGTGTTCTACGGTAAAACCAAAAATGAACCGCCGGCAACATTATTCAATCGTAAAAAAGGAAAATAA

Protein sequence : 
MTDSASLVVDNISVRYNNGHTAIQQMSFRLEGGTICALIGVNGSGKSTLFKSIMGLITPQQGQISLCGESVKLALKQHLV
AYVPQSEEVDWQFPISVYDVVMQGRYAHMNFLRMAKAADKAAVEQAMARMDITHLKDRQIGELSGGQKKRVFLARALAQQ
SKIILLDEPFTGVDVQTEVAIIDLLQQLREEGRLILVSTHNLGSVPDYCDQVVMINRTVIASGATATTFTQENLEKVFSG
VLRHIKLHGEHLHEDGDERAVTVLTDDEKAAVFYGKTKNEPPATLFNRKKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-70 61
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-70 61
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-69 60
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-70 60
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-69 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_00287 YP_004419221.1 zinc/manganese ABC transporter ATP-binding protein BAC0440 Protein 3e-92 68
UMN179_00287 YP_004419221.1 zinc/manganese ABC transporter ATP-binding protein BAC0350 Protein 8e-71 61
UMN179_00287 YP_004419221.1 zinc/manganese ABC transporter ATP-binding protein BAC0400 Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_00287 YP_004419221.1 zinc/manganese ABC transporter ATP-binding protein VFG0526 Protein 7e-71 61