Gene Information

Name : UMN179_00253 (UMN179_00253)
Accession : YP_004419187.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 258537 - 259298 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAATAGAATTAAGAAATATTAGTAAACAGTTCGGACAGCAAAAAGTAGTGGATAATGTGTCATTGGTTATTCCGGA
AGGAAAAATAACGGCATTTATCGGCCCGAACGGCGCGGGGAAAAGTACGTTATTGGCGATTATTAGTCGGTTATTAATGG
CGGATCAAGGTGAAGTGATTTTAAATGGAACTCCTTTGCAACAACAATCAAGTGAAAATATTGCACGTCAACTGGCGATT
TTAAAACAGAGTAATCATATTCCATTGCGTTTAACCGTTGAAGAATTAGTTTCTTTTGGTCGTTTCCCATATAGTAAAGG
AAGGTTAAATGAGGAAGATCATAATGCCATTGCACACGCTATTGATTATATGAATTTAAATGAATTGAAACATAAACAAA
TTCATTTATTAAGCGGTGGGCAACGGCAGCGTGCTTATATTGCAATGACATTGGCGCAAGATACAGATTATATTCTGTTG
GATGAACCGCTCAATAATTTGGATATGAAACACTCTGTACAAATTATGCAAGTATTACGCCAATTAGTAGAAAAATTAGG
GAAAACAGTCGTAATTGTTATTCACGATATTAATTTTGCTTCTTGTTATGCTGATAATATTATCGCAATGCAGCAAGGAA
AACTGATTGCTGAAGGTGCAGTAGATAATATTATGCAGACTGATGTTTTGGCAGATATTTATGATATGCATATTCCAATT
CAACAAATTAATGGGCAGAGAATTGCAACCTATTTCCGTTAA

Protein sequence : 
MAIELRNISKQFGQQKVVDNVSLVIPEGKITAFIGPNGAGKSTLLAIISRLLMADQGEVILNGTPLQQQSSENIARQLAI
LKQSNHIPLRLTVEELVSFGRFPYSKGRLNEEDHNAIAHAIDYMNLNELKHKQIHLLSGGQRQRAYIAMTLAQDTDYILL
DEPLNNLDMKHSVQIMQVLRQLVEKLGKTVVIVIHDINFASCYADNIIAMQQGKLIAEGAVDNIMQTDVLADIYDMHIPI
QQINGQRIATYFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-44 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-39 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-40 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-40 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-40 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_00253 YP_004419187.1 ABC transporter ATP-binding protein BAC0164 Protein 1e-44 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_00253 YP_004419187.1 ABC transporter ATP-binding protein VFG1042 Protein 1e-44 44
UMN179_00253 YP_004419187.1 ABC transporter ATP-binding protein VFG0925 Protein 6e-41 41