Gene Information

Name : UMN179_02203 (UMN179_02203)
Accession : YP_004421113.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : family 7 extracellular solute-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 2372871 - 2373854 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTTAACAAATTATTACTTGCCACACTATGTATGGGTCTTTCTGCAACCGCATTTTCTGCAGAATATGATTTAAA
AATGGGCTTAGTAGCCGGTCCAACATCAAATGAATACAAAGCTGCAGAATTTTTTGCGAAAGAAGTAAAGGCAAATTCTA
ACGGCAAAATTGAAATTTCACTTTATCCAAGCGCACAGCTTGGCGATGACCGCTCAATGATTAAACAACTCGGTGATGGT
GCATTAGATTTCACTTTCGGTGAGTCTGCTCGTTTCCAATTATTCTACCCGTCAGCAGAAGTGTTCGCACTTCCTTATAT
GATCCCAAATTTCAAAGTAGCGAAAGAAGCCTTGTTTGACACCAAATATGGTCAAAACTTGGTGAAAAAAGTTCACGATG
AATTGGGCATCACCATTTTAGCCGATGCTTATAACGGTACACGCCAAACTACCTCCAACCGTGCGATTAACAGCATTAAA
GATATGAAAGGCTTAAAACTTCGTGTACCGAATGCCGCAACTAACCTTGCTTATGCCAAATATTCCGGTGCTGCGCCTAC
ACCGATGGCATTCTCTGAAGTTTATTTAGCACTTCAAACCAATTCTGTAGATGGTCAGGAAAATCCATTACCGACCATTC
AGGCACAGAAATTTGAAGAAGTACAAAAATATTTGGCATTAACCAATCATATTCTTAATGACCAGCTTTATTTAGTCAGC
AATGCAACGCTTGAAGATTTACCTGAAGATCTACAAAAAGTCGTGAAAGATGCTGCTGAAAAAGCCGCTGATTACCATAC
AAAACTATTTGAAGACGGTGAAAAAAATCTTATTGCTTACTTTGAAAGTAAAGGTATGACTGTGACTAAACCGGATCTCG
TTCCGTTCAAAGAAGCAATGAAACCTTACTATGAAGAGTACATTAAGAAAAATGGTAAAGAAGGTGAAGAAGCGATTGCT
GAAATCAATGCTTTAACCAAATAA

Protein sequence : 
MKFNKLLLATLCMGLSATAFSAEYDLKMGLVAGPTSNEYKAAEFFAKEVKANSNGKIEISLYPSAQLGDDRSMIKQLGDG
ALDFTFGESARFQLFYPSAEVFALPYMIPNFKVAKEALFDTKYGQNLVKKVHDELGITILADAYNGTRQTTSNRAINSIK
DMKGLKLRVPNAATNLAYAKYSGAAPTPMAFSEVYLALQTNSVDGQENPLPTIQAQKFEEVQKYLALTNHILNDQLYLVS
NATLEDLPEDLQKVVKDAAEKAADYHTKLFEDGEKNLIAYFESKGMTVTKPDLVPFKEAMKPYYEEYIKKNGKEGEEAIA
EINALTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 4e-60 47
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 4e-60 47
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 2e-60 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_02203 YP_004421113.1 family 7 extracellular solute-binding protein VFG1112 Protein 2e-60 47