|
Name : UMN179_01927 (UMN179_01927) Accession : YP_004420839.1 Strain : Gallibacterium anatis UMN179 Genome accession: NC_015460 Putative virulence/resistance : Virulence Product : HlyD family secretion protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1566 EC number : - Position : 2082337 - 2083764 bp Length : 1428 bp Strand : + Note : - DNA sequence : ATGAATGTAAAATGCCAAGCTTTTAAGGACTTTTTAGTACGTTATTGTCAGCAATTTAGAGCAGTTTGGAAAATACGTCG CCAGTTAGATAATGTTGAACGTACAGAGGATGAATATCAATTTTTACCTGCTCACTTAGAACTTATTGAAAAGCCTGTCT CAGCATTACCTCGTTGGATTGCTCGATTAATTATGCTGTTAACGATTATTGCTGTTATTTGGGCAATATTAGGAAAAGTA GAGATTGTTGCATCTGCGATGGGTAAGTTAACTTATACCGGTAAAAGCAAAGTTATCCAGTCTGTTGAAACAGCCATTGT GAAAGGGATTTTTGTTAGAGATGGACAAAAAGTCACTCAAGGACAAAGATTGTTATCACTCACTACCTTAGGTGTAGAAG CTGATTTTGAAAAAACAAAAAAAGCATTAAAAGATGCGAGGTTAGCTGTAGCTAGAAATGAAGCGTTGTTAGAGGCTATG GCGACAAAAAAATCGCCAACATTAATTTTACCTAATGGGTTAAATACGACAGACGTTGATGTGGTAAATGCGCAAAATTT AATTGAGGAACAATTTAATACGTATATTAAGCAACGCGAACAGGCGGAATCATTATTGAAACAACGTGAGGCTGAGCGAG AGACGGCATTATATCAAGTTGAAAAATATCAAGGATTAGAAAAAATTGAAGCAATACGCTTAAATGATTTAAAAAGTCTG TATGAAAAATCAGCTTTATCCAAACATAGTTTTTTTGAACAAGAAACGAAAGTTATTGAAATTAGAAATGAACTAAGATC ACAACAAAATAAACTAGTTGAAATTGAAGCTAGTATTAAGCACGCTAGAGATGCTTATGATCTTTTATTATTTTCCTTTC GCCGAGATATGCAGGATGCGCTAAGACAAGCGCGAGAACAAGTTGAACAACTGGTTTTTGAAGAGCAAAAATTGGCTCAA CGTCAAAGTACGACATCAATTAATTCACCTGTTACGGGAACAGTACAACAATTGAATGTACATACTATTGGGGGTGTGGT GACAGATGCACAAAACTTAATGGTTATTGTACCTGAGGAAGATAAATTGGAAGTAACGGCATCAATAAGCAATAGTGATA TTGGATTTATCGAAGTTGGACAACCAGTTACCATAAAAATAGAGGCTTTTCCATATTCAAGATATGGCTATATTACAGGA ACAGTACGATCAGTGAGTTTTGATGCTATTGAGGATAAAGATCTTGGATTAGTTTTTTCAAGCATTATTAGTATTAATCA AGATTATTTAATTATTGAAGGTAAAAAGATCCCTTTAAGTGCCGGGATGCGCGTCACAGCAGAAATTAAAACGGGTAAGC GTCGAGTAATTAGTTATTTATTAAGCCCACTACAGGAAACTCTGAGCGAAAGTATGAGAGAAAGATAA Protein sequence : MNVKCQAFKDFLVRYCQQFRAVWKIRRQLDNVERTEDEYQFLPAHLELIEKPVSALPRWIARLIMLLTIIAVIWAILGKV EIVASAMGKLTYTGKSKVIQSVETAIVKGIFVRDGQKVTQGQRLLSLTTLGVEADFEKTKKALKDARLAVARNEALLEAM ATKKSPTLILPNGLNTTDVDVVNAQNLIEEQFNTYIKQREQAESLLKQREAERETALYQVEKYQGLEKIEAIRLNDLKSL YEKSALSKHSFFEQETKVIEIRNELRSQQNKLVEIEASIKHARDAYDLLLFSFRRDMQDALRQAREQVEQLVFEEQKLAQ RQSTTSINSPVTGTVQQLNVHTIGGVVTDAQNLMVIVPEEDKLEVTASISNSDIGFIEVGQPVTIKIEAFPYSRYGYITG TVRSVSFDAIEDKDLGLVFSSIISINQDYLIIEGKKIPLSAGMRVTAEIKTGKRRVISYLLSPLQETLSESMRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyD | AAC61717.1 | chromosomal hemolysin D | Virulence | PAI I CFT073 | Protein | 4e-99 | 50 |
| hlyD | NP_755449.1 | hemolysin D | Virulence | PAI I CFT073 | Protein | 1e-106 | 50 |
| hlyD | CAD33761.1 | Hemolysin D | Virulence | PAI I 536 | Protein | 1e-105 | 50 |
| hlyD | CAD42037.1 | HlyD protein | Virulence | PAI II 536 | Protein | 1e-105 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| UMN179_01927 | YP_004420839.1 | HlyD family secretion protein | VFG1502 | Protein | 8e-106 | 50 |
| UMN179_01927 | YP_004420839.1 | HlyD family secretion protein | VFG0908 | Protein | 5e-107 | 50 |
| UMN179_01927 | YP_004420839.1 | HlyD family secretion protein | VFG1556 | Protein | 6e-106 | 50 |
| UMN179_01927 | YP_004420839.1 | HlyD family secretion protein | VFG0843 | Protein | 2e-81 | 44 |
