Gene Information

Name : UMN179_00183 (UMN179_00183)
Accession : YP_004419117.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 201656 - 202903 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAATCATAGTTAAACAGCTGACCAACACAAAAATCACCAATGCCAAACCAAAAGACAAGGATTACACTTTAACTGA
TGGGAGAGGCCTTTATTTACTAGTGAAACCTAACGGCTTAAAAGTATGGCGTTTCCGATACAAACGCCCTTATACAAAAA
AGCCAGCATTGCTGACACTGGGAAGATTCCCTGAAACGACATTGCAATATGCAAGACAACAACGTGACCAATATCTCTCT
TTGCTTGCCCAACAAATTGATCCACAACAACACGAAAAACAAATAAAACAACTAGAACAACAACGGATAACGAATACATT
CAAAAACGTTGCGGAAAGCTGGAAAAACAGCAAAGCAAAAAGCATCAAACCGCTCACGCTCTCCAAATACTGGCGTATTA
TTGAACTTTACTTAATGCCTACCCTTGGCAATTACCCGATTGACGAAATCAAACCCATTTTAGCAAAAACAGCATTAGAA
GTGCCGTATAAACAAGGAAAAGCGGAAATGTACAGGAAAAGCGTTAAATTGCTGAACGCCATCTTAAATTATGCAGTCTA
TTCCCTGTTTCTGATCCCTGTTAACCCTTGTGAAAAAATCAGCACCGCTTTTGAACCTTTAGGCAGAGGGAAAAACCCAA
ACATTAAACCAGATGAATTACCAACATTCTTAGACAAGTTAGAAAACTCAAATATTGATCTATTAACAAAATACCTTATC
CAATGGCAACTATTAACAATGGTACGCCCTAATGAAGCGGTTACTGCTGAATGGACGGAAATTGATTTCTCAAAAAAACT
GTGGACCATCCCGGCTGAAAAAATGAAACAAACTAAAGCCAATCAAAACAAAGCGCATTTAGTGCCACTATCAACTCAAG
CCTTAAGTCTATTAGAACGCATTAAAACAATTTCCGCAAATTCACCGTTCCTGTTTCCAAGCCACAGAACAAAAACAAAG
CATCTGAATAGCCAAACTGCCAACAAAGCAATTAGAGACAATATGGGCTATAAAGACAAACAAACAGCACACGGATTACG
AAAAATTGCCAGCACATACCTGCACGAAATAGGCATAATGCCGGATGTAGTTGAAGCCTGTTTAGCACATACAATCAAAG
GCATCAGAGGAGTTTACAATGAAGCTGACTATTTGCCGCATCGAAAAAAAGCACTGCAAAAATGGGGAGACTACATAAAT
AAATGCAAAACTACAACAAATAAAAAATTTTTGAAAATTGTTGCCTAA

Protein sequence : 
MAIIVKQLTNTKITNAKPKDKDYTLTDGRGLYLLVKPNGLKVWRFRYKRPYTKKPALLTLGRFPETTLQYARQQRDQYLS
LLAQQIDPQQHEKQIKQLEQQRITNTFKNVAESWKNSKAKSIKPLTLSKYWRIIELYLMPTLGNYPIDEIKPILAKTALE
VPYKQGKAEMYRKSVKLLNAILNYAVYSLFLIPVNPCEKISTAFEPLGRGKNPNIKPDELPTFLDKLENSNIDLLTKYLI
QWQLLTMVRPNEAVTAEWTEIDFSKKLWTIPAEKMKQTKANQNKAHLVPLSTQALSLLERIKTISANSPFLFPSHRTKTK
HLNSQTANKAIRDNMGYKDKQTAHGLRKIASTYLHEIGIMPDVVEACLAHTIKGIRGVYNEADYLPHRKKALQKWGDYIN
KCKTTTNKKFLKIVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-70 44
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-70 44
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 3e-70 44
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 3e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_00183 YP_004419117.1 integrase VFG1092 Protein 1e-70 44