Gene Information

Name : UMN179_01677 (UMN179_01677)
Accession : YP_004420591.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1810832 - 1811725 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGACAGCACGTTAATCAACCTTTTTCTTGATGAACTTTGGCTAGGCAAAAATTTATCGCAAAATACTATCGCCAG
TTATCGTTCGGATCTTAAATTTCTGAGTGAATGGCTGGAAAAGCATCATTTAACCTTGCAACAGGTGCAGTATCTCGATT
TGCAGGCGTTTCTTGGTGAACGTTTACAACAAGGCTATAAAGCGACAAGTTATTCGCGAATGTTAAGTGCAATGCGGAAA
CTGTTCCAATATCTGTATCAGGAAAAATATCGTGAGGATAATCCTTGTTCACTGCTCACTTCACCCAAATTACCGGCACG
TTTGCCGAAATATTTAACTGAAAGCCAAGTGACTGATCTGTTAAATACACCGGCAACAGAAAATGCGTTGGAACTGCGCG
ATAAAGCAATGTTGGAGTTGTTATATGCGACCGGTTTGCGAGTGAGCGAACTGGTTTCTTTAACGACAAATAATATCAAT
TTGCAGCAAGGTGTGGTGCGGGTTATCGGTAAAGCGGACAAAGAAAGATTAGTGCCGATCGGCGAAGAGGCGAATTATTG
GGTACAACAATTTATCTTGTATGGCAGAGCGGAATTATTAGGTGGGCAGAGCAGCGATGTGTTGTTTCCGAGCCGGCAAG
GCAAGCTGATGACGCGCCAAACATTTTGGTATCGCATTAAACATTATGCGAGTTTAGCCAATATTGATGCGGACAAGCTA
TCACCGCACGTTTTGCGTCACGCTTTTGCTACGCATTTGGTCAATCACGGTGCCGATCTGCGAGTGGTGCAGATGTTGTT
GGGACACAGTGACCTTTCCACAACGCAAATTTATACCCACGTTGCCAAAGAACGCTTAAAACAGTTGCACAGCAAATACC
ATCCGCGCGGATAA

Protein sequence :
MKDSTLINLFLDELWLGKNLSQNTIASYRSDLKFLSEWLEKHHLTLQQVQYLDLQAFLGERLQQGYKATSYSRMLSAMRK
LFQYLYQEKYREDNPCSLLTSPKLPARLPKYLTESQVTDLLNTPATENALELRDKAMLELLYATGLRVSELVSLTTNNIN
LQQGVVRVIGKADKERLVPIGEEANYWVQQFILYGRAELLGGQSSDVLFPSRQGKLMTRQTFWYRIKHYASLANIDADKL
SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKQLHSKYHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-55 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-55 57