Gene Information

Name : UMN179_01656 (UMN179_01656)
Accession : YP_004420570.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1785903 - 1787390 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGTAACTTTAAAACAAAATTATGGTTTGTTAATTAACAATGAATGGCGTCCGGCATCAGATGGTGCAACCTATCC
GGCATATAATCCGGCTAACGGTGAATTGTTGGCACACTGTGCGGAAGCCACCAAAGAGGATGTTGATGCGGCAGTAACTG
CGGCAACTAAAGCATTCGAAACTTGGAAACAGACCACCCCTGCAGAACGTGCCGATTATTTATTAAAAATCGCCGACGCG
TTGGAAGCCCAAAAAGAACATTTTGCGATGGTGGAAACCTACGACAACGGTAAACCGATTCGTGAAACCAGCAACATTGA
CATTCCGTTTGCAATCGATCACTTCCGTTATTTCGCCGGCGTTATCCGCACCGAAGAAGGTTCCGCCACTATCCTTGACA
AAAATACTCTCTCTTTAATTTTGAATGAGCCGATCGGCGTTGTCGGTCAGGTTATTCCTTGGAACTTCCCGTTCCTAATG
GCGGCGTGGAAACTCGCACCGGCACTTGCCGCCGGCTGTACCGTTGTGATTAAACCGTCCAGCCACACTTCATTAAGCTT
ATTGGAACTCGGTAATATTTTGGCAGATATTTTACCGCCGGGCGTGGTCAATATTATTACCGGTAAAGGTTCTAAATCCG
GTCAATATATCTTAGATCACTCCGGTTTCAGTAAATTGGCATTCACCGGCTCAACTGAGGTCGGTCTTAACGTTTACAAA
GCAGCATCTTCTCGTTTAATTCCGGCAACTTTGGAATTGGGCGGTAAATCAGCCAATATCTTCTTTGAAGATGCAAAATG
GGATATGGCGATGGATGGCGCAATGCTCGGTATTCTCTTCAATCAAGGACAAGTTTGCTGCGCCGGTTCTCGTATCTTCG
TACAAGATACCATTTACGATAAATTCGTCACTGAATTGGCAGAACACTTCAACAAAGTGAAAGTCGGCTTACCTTGGAAA
GAAGATACCCAAATGGGTGCCCAAATCTATGAAAGCCAAGTGAAGAAAATTCTGCAATATGTTGATATTGCTAAGAAAGA
AGGTGCACGCGTGTTGGCTGGCGGTGAACGTATCACTGAAGGTGAACTCGGAAAAGGTTGCTTTATCCGTCCGACCTTGA
TTGTCGATGTCAAAAACGATATGTGCGTAGCACAAGAAGAGATCTTCGGACCGGTTGCCGTAGTGATTAAATTCCACGAC
GAAGCCGAAGTCATCAAAATGGCAAACGACAGTATTTACGGTCTTGGCGGCGGTGTTTGGACACGTGATATTAACCGTGC
TATCCGTGTTGCTCGTTCAATCGAAACCGGTAGAATGTGGGTCAATACCTATAATGCGATTCCTGCCGGCGCACCGTTCG
GCGGTTATAAACAATCAGGTATCGGTCGTGAAACCCACAAGATGATGCTTGATCACTATAGTCAAAAGAAAAATATTTTG
ATTAATCTCGCTGAAACACCTAGTGGTTTCTATGATGTTAGTAAATAA

Protein sequence :
MSVTLKQNYGLLINNEWRPASDGATYPAYNPANGELLAHCAEATKEDVDAAVTAATKAFETWKQTTPAERADYLLKIADA
LEAQKEHFAMVETYDNGKPIRETSNIDIPFAIDHFRYFAGVIRTEEGSATILDKNTLSLILNEPIGVVGQVIPWNFPFLM
AAWKLAPALAAGCTVVIKPSSHTSLSLLELGNILADILPPGVVNIITGKGSKSGQYILDHSGFSKLAFTGSTEVGLNVYK
AASSRLIPATLELGGKSANIFFEDAKWDMAMDGAMLGILFNQGQVCCAGSRIFVQDTIYDKFVTELAEHFNKVKVGLPWK
EDTQMGAQIYESQVKKILQYVDIAKKEGARVLAGGERITEGELGKGCFIRPTLIVDVKNDMCVAQEEIFGPVAVVIKFHD
EAEVIKMANDSIYGLGGGVWTRDINRAIRVARSIETGRMWVNTYNAIPAGAPFGGYKQSGIGRETHKMMLDHYSQKKNIL
INLAETPSGFYDVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-99 53
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-101 50
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-101 50
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-101 50
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-101 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_01656 YP_004420570.1 gamma-aminobutyraldehyde dehydrogenase VFG0082 Protein 3e-99 53