Gene Information

Name : UMN179_01523 (UMN179_01523)
Accession : YP_004420437.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : -
Position : 1651341 - 1652261 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAAACTCACCGTTCTTGGCAGTATTAATGCCGATCACGTTATTCAAGTTCCTCATTTTCCACAACCGGGAGAAAC
TTTATCCGGTCAAAATTACCATATCGTCTATGGCGGGAAAGGTGCAAATCAAGCGGTGGCGGCGGCTCGCTTGGGGGCAA
AAGTCGATTTTATTGCTTGTATTGGCGAAGATAAAATCGGGCTTGAGATGAAACAGGCTTTTCAAAAAGATGGCATAAAC
ACCGAAAGCATCGCTACAATTCAAGGTGAAACTACCGGTATCGCGATGATCCAAGTTACCGACAGCGGTGAAAACAGTAT
CGTCATTTCAGCCGGTGCCAATGCTCATCTCACCACTGACATTGTGGACAAATTTAAACAGAAAATTCTTGATGCTGATG
CGCTCTTGATGCAACTGGAAACGCCGTTGGACGCCATTATTTATGCCACCAAAATTGCGAAACAAGCTGGCAAACACACT
GTGCTAAACCCAGCGCCGGCAAAAGCGTTACCGGATGAGTTGCTTGCTCAATTAACGATGATTACCCCGAATGAAACCGA
AGCGGAACTGTTGACCGGCGTCAAAGTGGTAGATGAACAGAGCGCGGCACAGGCTGCGGCAGTGTTTCATCAAAAAGGGG
TTGCCATTGTTTTGATTACATTGGGGGCAAAAGGGGTATTTATCAGTCACAATGCATTACAAAAAATTATCCCCGGCTTC
CGTGTTCAGGCAAAAGACACCACCGCCGCCGGCGATACTTTTAACGGTGCGTTGGTAACTGCATTGTTGGAACAGAAATC
ACTGGAAGAAGCGATTCAGTTTGCCCACGCGGCAGCCGCTATCAGTGTTACCCGTTTCGGTGCGCAAACTTCTATTCCGA
GCCGTCAGGAAACGCTCGATTTTTTAGCCAATATCAAATAG

Protein sequence :
MQKLTVLGSINADHVIQVPHFPQPGETLSGQNYHIVYGGKGANQAVAAARLGAKVDFIACIGEDKIGLEMKQAFQKDGIN
TESIATIQGETTGIAMIQVTDSGENSIVISAGANAHLTTDIVDKFKQKILDADALLMQLETPLDAIIYATKIAKQAGKHT
VLNPAPAKALPDELLAQLTMITPNETEAELLTGVKVVDEQSAAQAAAVFHQKGVAIVLITLGAKGVFISHNALQKIIPGF
RVQAKDTTAAGDTFNGALVTALLEQKSLEEAIQFAHAAAAISVTRFGAQTSIPSRQETLDFLANIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 7e-30 41
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 4e-30 41
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_01523 YP_004420437.1 ribokinase VFG0483 Protein 2e-30 41