Gene Information

Name : UMN179_01262 (UMN179_01262)
Accession : YP_004420178.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : response regulator FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1365380 - 1365961 bp
Length : 582 bp
Strand : -
Note : -

DNA sequence : 
GTGAAAGTACATATCTTAGATGATGATGAAACGGTGGTCGATGCGGCAACATTTCTGCTTACTCAAGCAGGTTATGATGT
TGTCAGTTGGTCAAACAGTAAAACTTTTTTAGAACAGGTTAACCCTTTTGAACCGGGAGTAGTGCTGTTGGATATGCGAA
TGCCCTATTTTGACGGTCGCCAAGTGCATAAAATACTCAAACAACAAAACAGCGTATTACAAGTTATTATTATGACAGCG
TTTGCCGATGTGGATATGGCAGTCAATGAATTAAAGCAAGGTGCTATCGACTTTTTACAAAAACCGATTCTTTTTGATCA
GCTTAAAACTGCATTAGAAAATGCACGCATTCGCAGTGAAAAACGCTTTCAACAATATCAAATTGAGCAATGTTACGATC
AACTTAGTGAAAAAGAGAAAGAGGTATTGGCATTAATTATTGAAGGGAATATCAACAAACAGATCGCAGAACGCCTCAAT
ATTTCCGTGAGAACCGTTGAAGTCCACCGCTCACACATAATGGAAAAAATGAATGCCAAAAATGTTGCCGAGTTAATCAG
AAAAGCGGATTTACTCAATTAG

Protein sequence : 
MKVHILDDDETVVDAATFLLTQAGYDVVSWSNSKTFLEQVNPFEPGVVLLDMRMPYFDGRQVHKILKQQNSVLQVIIMTA
FADVDMAVNELKQGAIDFLQKPILFDQLKTALENARIRSEKRFQQYQIEQCYDQLSEKEKEVLALIIEGNINKQIAERLN
ISVRTVEVHRSHIMEKMNAKNVAELIRKADLLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-44 50
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-44 50
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-44 50
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-44 50
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-44 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_01262 YP_004420178.1 response regulator FixJ VFG0488 Protein 6e-45 50