Gene Information

Name : PT7_0871 (PT7_0871)
Accession : YP_004416035.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Unknown
Product : transposase TnpC protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 980726 - 982309 bp
Length : 1584 bp
Strand : +
Note : -

DNA sequence :
ATGACGGCCATGCTCAACCGCACCCAACTGCCCGACAATATCGACGCCCTGAAGGCGTTGCTGTCGGCCAAATCCGCCCA
GATCGATGCCTTCGAGCAAGAGCGCGCGGCGTGGCAGGTAGAGCGCGAAGCCCTGCGTCAGGATAAGCAGGGCGATCAAC
AAGAAATTGCCCGTCTGACGCTGTTGCTCGATAAACTACGGCGCGCCTTGTTCGGCCAGAAGTCTGAGAAGCTTGCGGGC
CAAATCGATCAATTGCAGCTCGAACTCGAAGAGCTGCACATTAACCAGGGCGAACGCGCGCAAAGCATTGAATCGGCCCA
AGCGCCTGCCTCGCGCCCCGCGCCGCAGCGTCGGCCATTACCCGAGCACTTACCGTGCGAGGTGCATGAACATCTTCCCA
AGGAGTCTGCCTGCCCCGACTGCGGCGGCGCGTGGACGCGCTTGGGCGAGGACGTGAGCAATGTGCTGGAACACGTGCCG
GCCAGCTTTAGAATCGTTCGCCATGTGCGCCCACGCCTGGCGTGCAGTTGTTGCGAGCGGATGGCGCAAGCGCCCGCGCC
CAGCCGCCCCATTGCCCGCAGCTTCGCGGGGCCAGGGCTATTGAGCCATGTCATGGTCAGCAAATATCTGGACCATCAAC
CGCTGTACCGCCAGTGCCAGATCTACGAGCGCGAGAACGTGAGTTTAAGTGAGAGCACCGTCGGTGACTGGGTCGGTGGG
GTGCACCAATTGCTGCGCCCTTTACTGGAGGCGCTACGCCGCCACGTCTTTAGCGCCGACAAACTGCATACGGACGATAC
CCCGATCAACGTACTTGCGCCGGGCACTGGCAAGACACGCCAGGCGCGCCTGTGGGTCTATGCTCGTGATGATCGGCCCA
GTGGCGATACGACAGCGCCGGCCATGTGGATACGTTACTCGCCCGATCGGCGCGGCATCCACCCGCAAACGCACCTGAAG
GATTACATCGGTATCCTACAGGCCGATGCGTTTGCCGGGTACGACAAGATTTATGAATCAGGCCGTGTGCTAGAGGCCGG
ATGCTGGGCGCACGCCCGACGTAAGTTCTACGACATCCACGTTAAAAGTGCCACGCCCATTACGACGCACGTGCTTGATC
GGATCGCCGCCCTCTACAAGATTGAGTCCAGCATCCGCGGTAGCCCAGCGGACGTACGGCGAAGGGTTCGCCAGGAACAC
GCCAAGCCCCTCGCCATCGCGCTGCATGCCTGGCTGCGCGAACAGTTGACGACCATCTCGCGCAAATCGAATACGGCCGA
CGCCATCGCTTATGCCATGAATCAGTGGCAGGCACTGGTGCGTTATCTGGACGATGGGCGCATTGAGATCGACAACAATA
CCGCCGAGCGAGCGTTGCGCGGGGTAGCCCTGGGCAGGAAAAACTACCTGTTTCTGGGGTCCGACGCGGGCGGTGAACGC
GCGGCCACGATGTACAGCCTACTTGGCACAGCCAAATTGAACGATATCAATCCCCAAGCGTACCTGCGCCACGTCTTGAG
CGTGATCGCCGACCATCCGGTGAACCGGGTTGACGAGCTGCTGCCCTGGAACGTCGCGCTTTAA

Protein sequence :
MTAMLNRTQLPDNIDALKALLSAKSAQIDAFEQERAAWQVEREALRQDKQGDQQEIARLTLLLDKLRRALFGQKSEKLAG
QIDQLQLELEELHINQGERAQSIESAQAPASRPAPQRRPLPEHLPCEVHEHLPKESACPDCGGAWTRLGEDVSNVLEHVP
ASFRIVRHVRPRLACSCCERMAQAPAPSRPIARSFAGPGLLSHVMVSKYLDHQPLYRQCQIYERENVSLSESTVGDWVGG
VHQLLRPLLEALRRHVFSADKLHTDDTPINVLAPGTGKTRQARLWVYARDDRPSGDTTAPAMWIRYSPDRRGIHPQTHLK
DYIGILQADAFAGYDKIYESGRVLEAGCWAHARRKFYDIHVKSATPITTHVLDRIAALYKIESSIRGSPADVRRRVRQEH
AKPLAIALHAWLREQLTTISRKSNTADAIAYAMNQWQALVRYLDDGRIEIDNNTAERALRGVALGRKNYLFLGSDAGGER
AATMYSLLGTAKLNDINPQAYLRHVLSVIADHPVNRVDELLPWNVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-119 56
tnp AEA34686.1 transposase Not tested Not named Protein 5e-118 56
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-116 56
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-116 56
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-117 56
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-117 56
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-117 56
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-117 56
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-117 56
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-117 56
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 6e-109 54
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-116 53
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 7e-117 52
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-117 52
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-108 52
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-107 48
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-107 48
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 8e-76 41
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 5e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_0871 YP_004416035.1 transposase TnpC protein VFG0793 Protein 2e-117 56