Gene Information

Name : PT7_0779 (PT7_0779)
Accession : YP_004415943.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 880740 - 881513 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence : 
GTGCGCTTGCCCACAAAAAATCGTTCAGGCCTGCGCCTGTTGACGGCCCTGGCCGTGCTGGCCGCGCTGCTCTGGCCCGC
AATGGGCCTGGCGCAGACCACACTGCCCGCCCTGACCTCGGCGGTCAATCCGGATGGCAGCCAGACCTGGTCGCTCAGCA
TACAGACACTGGTCTTGCTGACCATGATGTCTTTCCTGCCAGCCATGCTCATGATGATGACGGGCTTTACCCGCATCATT
ATTGTGCTGGGCCTGTTGCGCAACGCCATGGGTACCGGCGCCTCGCCGCCCAACTCGATACTGATCGGCCTGGCGCTGTT
CCTGACTTTCTTTGCCATGTCGCCGGTATTCGATCAGATCTATGCCGACGCCTACCAGCCGCTGAGCAATGGCGTCATCG
CGTTCGAAGAAGCGTTGGAGCGCGGCATCAAGCCGCTGCACAGCTTCATGCTGCATCAGACGCGCGAAGCGGACCTGACC
ATGTTCGCCAACATGGCCAATGTGGCCGAGCTGCAAACCGCCGAGGAAGTGCCATTGCGTGTGCTGGTGCCCGCTTTTAT
GGCCAGCGAACTCAAGACCGCCTTCCAGATCGGCTTCACCATCTTCATTCCTTTCCTCATCATCGATCTGGTGGTGGCCA
GTGTATTGATGGCGCTGGGCATGATGATGGTTCCGCCCGTGACGATTTCACTCCCCTTCAAGCTTATGCTGTTCGTGCTG
GCCGACGGCTGGCACTTGCTGCTGGGGTCTCTGGCCCGCAGCTTTTACCAGTAA

Protein sequence : 
MRLPTKNRSGLRLLTALAVLAALLWPAMGLAQTTLPALTSAVNPDGSQTWSLSIQTLVLLTMMSFLPAMLMMMTGFTRII
IVLGLLRNAMGTGASPPNSILIGLALFLTFFAMSPVFDQIYADAYQPLSNGVIAFEEALERGIKPLHSFMLHQTREADLT
MFANMANVAELQTAEEVPLRVLVPAFMASELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTISLPFKLMLFVL
ADGWHLLLGSLARSFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-26 43
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 6e-20 43
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 5e-20 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-27 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-27 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-27 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 9e-19 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 9e-19 42
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 7e-20 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 9e-20 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 8e-28 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 8e-28 41
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 8e-28 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_0779 YP_004415943.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-70 67
PT7_0779 YP_004415943.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-66 66
PT7_0779 YP_004415943.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-55 57
PT7_0779 YP_004415943.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-56 56
PT7_0779 YP_004415943.1 flagellar biosynthesis protein FliP VFG0044 Protein 6e-31 43