Gene Information

Name : PT7_3552 (PT7_3552)
Accession : YP_004418716.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Virulence
Product : DedA family membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 3744099 - 3745379 bp
Length : 1281 bp
Strand : +
Note : -

DNA sequence :
ATGCTCATCGTAATCTTTGTGGCGTCACTGCTGGCGGCCATGGCGCTTGGCGTGCCAATCGCGTTTTCATTGATGGTCTG
CAGCATGGCCATGATGTGGTACATGGATTTCTTCGATGCCCAGATCATGGCGCAGAACATGCTGTCTGGCGCGGACAGCT
TTCCCCTGATCGCCATTCCATTCTTTGTCCTGGCGGGCGAGCTCATGAACGCAGGCGGGATATCCCGGCGGATTGTTGAG
GTCGCAGGCGCCTGGGTTGGGCATTTCAAGGGAGGGCTGGGTTATGTAGCCATCTTCGCGTGCGTCATCATGGCTTCGTT
GTCGGGGTCTGCCATAGCCGATACCGCCGCGGTGGCTGCGCTGCTCATCCCCATGATGCGCAATGCGGGCTATAGCGTGC
CGAGGGCGTCCGGCCTGATTGCCTCCGGCGGCATTATCGCCCCCATTATTCCGCCTTCCATAGGCTTTGTGATGGTGGGT
GTGGTGGGCAATATTTCCATCACCAAACTATTCATTGCCGGCATTGCGCCTGGATTGATGATGGCCCTGGCGCTGGTTGC
CACCTGGACTTTTCAGGCCCGGCGCGAAGGTATGCCACGGGGTGAAAAGAAGTCTGCCCGCCAGCGCTGGTCGGCAACGC
TAGCCGGCTTCTGGGCGCTGCTCATGCCGGTGATTATTGTGGGCGGCCTAAGATCAGGCTATTTCACACCGACCGAAGCC
GCGGTGGTCGCAGTGTTCTATGCCTTGTTTGTCGGCTTTTGCGTATACCGGGAACTCAAAGTGCGGCAGCTGTATGGCCT
GCTGCTCGCCGCCGGCAAGACTTCCGCGATTGTGATGTTCCTGGTTGCCGCTGCGCAGGTTTCTGCATGGTTGATTGCTG
CGGCCAACATTCCCATGGTCGTAGCCGACGTCCTGCAGCCATTGACCGACAGCCCGATCCTTTTGATGCTGGCGATCATG
CTGCTGGTTTTCGTCGTGGGTACTGTGCTGGACTTCGCGCCCACCATACTGATCCTGATACCTGTCTTGATGCCCACTGT
CCGGATGGCGGGCATAGATCCGGTGTATTTCGGCGTGCTGTTCATCATGAACAATGCCATAGGCCTGATCACGCCGCCCG
TCGGTACGGTGCTCAATGTAGTGTGCGGTGTGGCCAAGGTAAGAATGGAGCCTGTCATCCGCGCCGTGACCCCGTATTTG
CTGGCGCAGTTTGCCGTATTGCTCCTGCTTGTGCTGTTTCCACAATTGATTCTGGCGCCGCTGCACTTCATGACCCGCTA
G

Protein sequence :
MLIVIFVASLLAAMALGVPIAFSLMVCSMAMMWYMDFFDAQIMAQNMLSGADSFPLIAIPFFVLAGELMNAGGISRRIVE
VAGAWVGHFKGGLGYVAIFACVIMASLSGSAIADTAAVAALLIPMMRNAGYSVPRASGLIASGGIIAPIIPPSIGFVMVG
VVGNISITKLFIAGIAPGLMMALALVATWTFQARREGMPRGEKKSARQRWSATLAGFWALLMPVIIVGGLRSGYFTPTEA
AVVAVFYALFVGFCVYRELKVRQLYGLLLAAGKTSAIVMFLVAAAQVSAWLIAAANIPMVVADVLQPLTDSPILLMLAIM
LLVFVVGTVLDFAPTILILIPVLMPTVRMAGIDPVYFGVLFIMNNAIGLITPPVGTVLNVVCGVAKVRMEPVIRAVTPYL
LAQFAVLLLLVLFPQLILAPLHFMTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-37 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-37 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_3552 YP_004418716.1 DedA family membrane protein VFG1110 Protein 1e-37 41