Gene Information

Name : PT7_0318 (PT7_0318)
Accession : YP_004415482.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB4
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 374911 - 376986 bp
Length : 2076 bp
Strand : -
Note : -

DNA sequence :
ATGATCAACGAGCTGTACCTAACAGTCAACGTTCGACTGATGATCGACTCATCGATGAAGTTGTTCTCTCGCCTGGAGAA
ACGCACAGCCAAAGATGTGCAACGATGGCAGGATCATGCGATATCACAATTGAACGATATCAATCGAAAGCTTAAAGCAG
GATTGAAGCGATATGACGGTGAGCTGCTAGGTATCGTAGAACGTGATGGCAAGCAATTTTCTGAGGCGGGCGAGTTTCTA
GGCTTCTTATTAAACGGCAGTCGCGATCACGTGCCGGTACTGCGCACGCGCCTTTGTGATTATTTGCCTCGGGCGCGACC
TTTTTTCTCAATCCACGGCCCCCAGGGTGAGTTGAGCCGGACGACCAAATCGCGCCGCTTCGCCATGATTGAAGTGCGAG
ACTATCCGTCCAAAAACCGGCCCGGTCACTTGAACGACCTGTTAACGCTGCCGTTTGAGTTCATCCTTACCGACTCATTC
GCATCGATGTCCAAAGCAGATGGCCGCGCTGCTCTCGCGCGGCAATTGCGGTGGCTAAAAGATTCGGGCGACGATTCCCG
AACACAGATCATTGAGTTGAATCAGGCTATGGATGATCTAGCGGCAGGAAAATTCGTCATGGGCGAACATCATTGTTCCA
TGATGGTGTTTGGAGAAGATGGCGAAGAAACTCTCCGAAACGCTGAAGATGCCTTGGGAGTACTTAGCAGTAATGAGGTT
ATTGGCCATGTCGTGGATCGTGCATCCGTGGCAGCGTGGAGAGCACAGCTACCCTGCAATTGGTTCTGGCGTCCTAGGCC
AGCTGTCATTACCTCGCAAAACTTTTTGAGCTTTTGCGGCTTACACAATTACCTGTTTGGCAAACCGGCTGGCAATCCGT
GGGGCCCCGCTGTCACGATGCTCAAGACCAATAGTGGCACGCCCTATTTCGCGAACTTCCATACGTCCTTGGACGAGGTG
GATGAAACCGGCAAGCGCCGGTTGGGCAATACGATGATCATCGGCCAATCTGGAACTGGTAAATCAGTACTCCTGGCCCA
CTGCTTAACGCAAGCACGCAAGTTTGGATATACCGGGGCAGTTTTCGACAAGGACCGGGGGCTGCAGGTCACGCTCGAGG
CCATGGGTGCAAAGTATGCTGTACTTGAGCTGGGACGTTCAACTGGCTGGAACTATCTGCAGCTTGAGCCATCTCAGCGC
AACGTTGCGTTTATGTGCAGGTTGACCACTCAGCTGGCCCACCGAGGCGACAAGGAGGCGACGTTGCGTGAGCAGCGGGC
CATCTCAGAGGCCATCGACCAATTGACCCAGTATGTTGATCTTTCGAACCGCAGGCTGACCACGCTTTTGGGCTTCTTGC
CTAACGTTCCAGGTGAATCAGGCGAACTAAGCTTGCGCGAACGCTTGCAACGATGGTGCGAGGGCCATGAGCATGGCTGG
GTATTTGATAATCCGACAGATGAGCTCAACCTTTCCGATCACGATCTCTTTGGTTTTGATATTACCGAGTTCCTTGAAGA
AGGCCCGGTACGCGACGCAGGGTTAACTTACCTAATCTATCGCACCGAGGACATGATCGACGGACGTCGATTTATGTATG
TTTTTGACGAAGTTCAACACGCATTGAATGCGCCTTATTTCCAAGATTTGGCACAAAACAAATCTCGAACCATTAGAAAG
CAGAACGGCATATTCATCTTCGCCACCCAGGAGCCCGAAGCCATTACGGGCAACCCGGTGGGCAAATCGCTGATTCAGCA
ATCGGCCACGGCCTTTTACCTGCCGAACATGAAGGCCACTAAAGAAGAATATGTCGACGGCTTCAAATTGAATCCGGCGG
AGTTCGAGCTCATCAAGGAGCTTGGCGAGTTCAGCCGTAAGTTCGTCGTCAAACAAGGCGAGGCAGTTGTAACGGCCACA
CTGGACTTGTCCACTTGTCCTGATTCCTTGCTCGTGTTCTCCGGCTCCGAAGATGTTGCCGCGCTAGCACAGGCCGCACG
GATTGAGGTCGGACCCGACCCACAGAAATGGGTACCTCTTTACTGTCAAAAAGTCGCTCAACTGGGCAAATCCTAA

Protein sequence :
MINELYLTVNVRLMIDSSMKLFSRLEKRTAKDVQRWQDHAISQLNDINRKLKAGLKRYDGELLGIVERDGKQFSEAGEFL
GFLLNGSRDHVPVLRTRLCDYLPRARPFFSIHGPQGELSRTTKSRRFAMIEVRDYPSKNRPGHLNDLLTLPFEFILTDSF
ASMSKADGRAALARQLRWLKDSGDDSRTQIIELNQAMDDLAAGKFVMGEHHCSMMVFGEDGEETLRNAEDALGVLSSNEV
IGHVVDRASVAAWRAQLPCNWFWRPRPAVITSQNFLSFCGLHNYLFGKPAGNPWGPAVTMLKTNSGTPYFANFHTSLDEV
DETGKRRLGNTMIIGQSGTGKSVLLAHCLTQARKFGYTGAVFDKDRGLQVTLEAMGAKYAVLELGRSTGWNYLQLEPSQR
NVAFMCRLTTQLAHRGDKEATLREQRAISEAIDQLTQYVDLSNRRLTTLLGFLPNVPGESGELSLRERLQRWCEGHEHGW
VFDNPTDELNLSDHDLFGFDITEFLEEGPVRDAGLTYLIYRTEDMIDGRRFMYVFDEVQHALNAPYFQDLAQNKSRTIRK
QNGIFIFATQEPEAITGNPVGKSLIQQSATAFYLPNMKATKEEYVDGFKLNPAEFELIKELGEFSRKFVVKQGEAVVTAT
LDLSTCPDSLLVFSGSEDVAALAQAARIEVGPDPQKWVPLYCQKVAQLGKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 3e-156 47
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 2e-156 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_0318 YP_004415482.1 type IV secretion system protein VirB4 VFG2259 Protein 1e-156 48