Gene Information

Name : PT7_3177 (PT7_3177)
Accession : YP_004418341.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Unknown
Product : transposase TnpC protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3347304 - 3348902 bp
Length : 1599 bp
Strand : +
Note : -

DNA sequence :
GTGGCCATGCTTAACCGTGCCAAACTTCCCGACAATATCGACGATTTGAAGGCGTTGTTGTCGGCGCAATTGGACGAAAC
CCAGGCGCTGCGCGAAGCGCACCGCACACTGAAAGAAGAGCATCAAGAGCTCCGGGTTGAGCGTGATTTATTACGCCAGG
AGAAGCAGTTCGACAAGCAAGAGATCCAGCGTCTGATGCTGCTCCTGTTCAAGCTCAAGCGCCAGGTGTTTGGCCAGAAG
TCTGAGAAACTGCTGCGTCAAATCGATCAACTCGAGCTTGAACTCGAAGAGCTGCACATCAACCAGGGCGAGCGCGCGCA
AAAAACCGAATCGATCACACCGACGGCGCGTCCCGCGCCTGCGCGCCGGCCTATGCCCGAGCACCTGCCGCGCGACATCC
AAGAGCATCTGCCCCAAGCGCCAGCGTGCCCCGATTGCGGTGGCGCGTGGCAGCGTTTGGGTGAAGACATCAGCGAAGTC
TTGGAGTACATCCCATCGAGCCTGCGCGTCGTGCGCCATGTGCGCCCACGCTTGAGCTGCCGCTGTTGCGACCGGATGGC
ACAGGCCCCGGCACCTAGCCGTCCAATTGCCCGCAGCTTCGCTGGTCCGGGCCTACTGAGCCACGTCATGGTCAGCAAGT
ATCTGGACCACCAACCGCTGTACCGCCAATGCCAGATCTTCGGGCGCGAGAACGTGGACTTGAGCGAAAGCACGATGGGC
GACTGGGTCGGTGGCACGCATCATTTACTGCGACCCTTGCTTGATGCGCTGCAACGCTACGTTTTTAGTTCGGCCAAGCT
GCATACGGATGACACACCCATCAATGTGCTGGCCCCAGGTGCAGGCAAAACGCGACAAGCGCGGCTGTGGGTATACACGC
GCGACGATCGTCCCAGCGGCGACACTGCCGCGCCGGCGGTCTGGTTCAGATACTCGCCCGATCGAAAAGGCATCCATCCG
CAAACACACCTGAAAGACTATGCCGGCATTGTGCAAGCCGACGCATTTGCCGGATACGATAAGGTCTACGCAACGGGCCG
AGTCATCGAGGCCGGATGCTGGGCCCATGCGAGGCGTCGTTTCTACGATATCCATGCCAAGCAGGCCACGCCCATCACGA
CGCATGTGCTTGATCGGATTGGCGCGCTTTATAAAATCGAATCGGGCATCCGGGGCAGCCCGCCCGAAGTACGACGTGCA
GCGCGTCAAGAACAGGCCGAACCCATCGTGATCGCATTGCATGCGTGGTTGCGAGAACAGTTGCCGACCCTATCACGTAA
ATCCGATACAGCGGACGCCATTGGCTATGCCATGAATCATTGGCAGGCGCTGACACGCTTCTTGGACGATGGGCGTATCG
AAATCGACAACAATGCCGCAGAAAGGGCCTTGCGCGGGGTAAGCCTTGGCCGCAAGAACTATCTGTTTCTTGGATCGGAT
GCCGGCGGCGAGCGCGCCGCCACCATGTACAGCTTGCTGGGCACCGCCAAACTGAACGGCATCAATCCCGAAGCCTACCT
TCGCCATGTGCTAACCGTCATCGCTGACCATCCGGTCAATCGCGTCGACGAACTGTTGCCCTGGAACGTGACGCTTTAA

Protein sequence :
MAMLNRAKLPDNIDDLKALLSAQLDETQALREAHRTLKEEHQELRVERDLLRQEKQFDKQEIQRLMLLLFKLKRQVFGQK
SEKLLRQIDQLELELEELHINQGERAQKTESITPTARPAPARRPMPEHLPRDIQEHLPQAPACPDCGGAWQRLGEDISEV
LEYIPSSLRVVRHVRPRLSCRCCDRMAQAPAPSRPIARSFAGPGLLSHVMVSKYLDHQPLYRQCQIFGRENVDLSESTMG
DWVGGTHHLLRPLLDALQRYVFSSAKLHTDDTPINVLAPGAGKTRQARLWVYTRDDRPSGDTAAPAVWFRYSPDRKGIHP
QTHLKDYAGIVQADAFAGYDKVYATGRVIEAGCWAHARRRFYDIHAKQATPITTHVLDRIGALYKIESGIRGSPPEVRRA
ARQEQAEPIVIALHAWLREQLPTLSRKSDTADAIGYAMNHWQALTRFLDDGRIEIDNNAAERALRGVSLGRKNYLFLGSD
AGGERAATMYSLLGTAKLNGINPEAYLRHVLTVIADHPVNRVDELLPWNVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 9e-122 54
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 6e-125 54
tnp AEA34686.1 transposase Not tested Not named Protein 2e-125 54
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-124 54
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-124 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-124 54
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-124 54
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 8e-125 54
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-125 54
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 9e-125 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 8e-124 53
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 8e-124 53
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-125 52
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-113 49
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-87 49
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 6e-115 48
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 4e-114 48
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 4e-114 48
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 5e-99 44
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 4e-99 44
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 1e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_3177 YP_004418341.1 transposase TnpC protein VFG0793 Protein 6e-125 54
PT7_3177 YP_004418341.1 transposase TnpC protein VFG1051 Protein 3e-87 49
PT7_3177 YP_004418341.1 transposase TnpC protein VFG1736 Protein 3e-87 47