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Name : PT7_2213 (PT7_2213) Accession : YP_004417377.1 Strain : Pusillimonas sp. T7-7 Genome accession: NC_015458 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 2365206 - 2368430 bp Length : 3225 bp Strand : + Note : - DNA sequence : ATGACCGAAGACCAACTCGAGCAGGAAGCCCTGGGCTGGCTGGCAGACGTCGGCTACACCCCCCGCAGCGGCCCGGATAT CGCCCACGACGGCTCCGACCCTCAGCGTAGCGGCTATACACAGGTGACTCTGCCGCAACGTCTACGCGATACCATCGCCC GACTGAACCCCGACATTCCCGCTATCGCCCGTGATGAAGCTTTAAAACAGGTGGAAAACCTGGATACCCCTGTTCAGTTG GCCGCCAATTGCGCTTTCCACAAGCTGATGGTCAATGGCGTTCCCGTGCAGTATCAGAAGGATGGCGAAACCCGTGGTGA CCTGGTTCGCCTGGTGGATTGGGCGAACCCGAAAAACAACGAATTTTGGGCAGTCAGCCAGTTCACCATCAAAGGCCCGC ACCATACCCGCCGTCCAGACATTATCCTGTTCATCAACGGCCTGCCACTGGTTCTGCTGGAACTGAAGAACGCCGTCAAC GAAGGGGCCGATATCTGGAAGGCCTACGACCAGCTTCAGACCTACAAGGCGCAGATTCCCGATATCTTCGAGTACAACGA AATACTGGTCATTTCGGACGGCAGCGAGGCCCGCTTCGGGTCGTTATCTGCCAACGCCGAGCGCTTCATGCAATGGCGCA CCATTGATGGCGTGGAGCTTGACCCGCTAGGCCAGTTCAATGAATTGGAAACTCTGGTGCGCGGCCTGCTTGCGCCCCAA TACTTGTTGGATTACCTGCGTTACTTCGTGCTGTTTGAAGACGATGGCACGCTCATCAAGAAGATTGCTGGTTACCACCA GTACCATGCCGTGCGTTTCGCCATCGAAGAAGTGGTGCGGGTGTCGCGCCCTGATGTGGAAAAAGGTAAACGCGGCAAGG GCGGTGTGGTATGGCATACCCAGGGCAGCGGCAAGAGCATTACCATGACTTGTTTTGCGGCACGGGTGATGCAGGAACCG GCCATGCAGAATCCCACTATTGTGGTAATTACCGACCGCAATGACCTGGATGGACAACTGTTTGGCGTATTCAGTCTGTC GCAGGACCTATTGCGCGAACAGCCCGTACAAGCCACCACACGCCAGCAATTGCGGGCCTTGCTGGGTAACCGGCCCTCTG GCGGCATTGTGTTTGCCACCATCCAGAAATTTATGCCCGGTGAGGATGAAGACATCTTCCCGGAGTTATCCGACCGCAGC AATATTGTAGTGATTGCCGACGAGGCGCACCGTACGCAATATAGCTTTGAAGCCAAACTGAAGACCCGCAAGAACAAGGC CGGTAACCTAGCGACTGCTTATCACTTGGCTCCCGATAACGAACCCAGTACGGCGTTCGCCACAGAGCTCGCAGGCTCCG AGGATTACCTTAGCAAGTATCAAACCGGATACGCTCAGCACCTACGCGATGCCTTGCCCAACGCAACGTTCGTGGCTTTC ACCGGCACTCCAGTCAGCAGCACCGACCGCGATACCCGCTCCGTGTTCGGCAATTACATCCATGTCTATGATATGCAGCA GGCCAAGGAGGACGGCGCCACCGTCGCCATCTACTACGAGTCACGCTTGGCCAAGCTTAAGCTCAAGGAAACCGACCTGG AAGCCATTGATGAAGAAGTGGATGAGCTGGCTGAAGATGAAGAAGAACAGACCCAGGCTCGCCTCAAGTCAAAGTGGGCT GCGTTGGAGAAGGTGGTGGGTGCGGAACCCCGCGTCGCCAGCGTGGCCGCCGACCTAGTTGAGCACTTCGAGGAACGTAA CAAGGCTCAGGACGGCAAGGCCATGGCCGTTGGTATGAGCCGCGATATCTGCGTGCATCTGTATAACGAAATCATAAAGT TGCGCCCTGACTGGCACGATGAGGACCCTGAGCAAGGCACCATCAAGGTCATCATGACCGGCAGCGCCAGCGACAAGGCC TTGCTACGTCCACATATCTACAGCGGCCAGGTAAAGAAACGCCTGGAAAAACGCTTTAAGGACCCGGCCGACCCTTTGAA AATGGTCATTGTGCGCGATATGTGGCTGACCGGCTTCGATGCCCCTTGCGTACATACCATGTACATCGATAAGCCCATGA AGGGCCACAACCTGATGCAGGCCATTGCTCGTGTGAACCGAGTGTTCCGCGACAAGCAAGGCGGTCTGGTGGTCGACTAC ATCGGCATAGGCAACGAACTAAAAGCCGCCATGAAAGAATACACGGCCAGCAAAGGCCGTGGCAAGCCGACCGTAGACGC GTACGAAGCCCTGGCCGTGATGTTGGAAAAACTGGATGTATTACGCGCCATGCTGCATGGCTACGACTACTCCGGCTTCA AGACCGGCGGCCATAAGGCACTGGCGGGCGCTGCCAACCACATCCTGTCACTGCGCCCACCGCCCGGCCAGAAGGACGCC AAACTGGACGGCAAGAAGCGCTTTGCCGATGCCGCACTGGCTTTAAGCAAAGCCTTTTCACTGTGCTGCACCCTGGACGA AGCCAAGACCCTGCGCGATGAAGTGGCATTCATGCAGGCGGTGAAGGTCATTCTGACCAAGCGCGACATCAGCGCCCAGA AGAAAACCGACGAACAGCGCGAAATCGCCATACGCCAAATCATCAATCAGGCTGTGGTCAGCGAAAGCGTGGTCGATATC TTCGACGCCGTCGGCCTGGAAAAGCCCAATATCGGCTTGCTGGACGACGAGTTCCTTGCCCAGGTGCGCAACCTGCCCGA GCGCAACCTTGCGGTTGAGCTGCTAGAGCGATTGCTGGAAGGCGAGATCAAAAGCAAGTTCGCCAGTAATCTCGTGCAGC AGAAGAAGTTTTCTGAGATGCTCAGCGGCGTCATCACGCGCTACCAGAACCGCAGCATTGAAACGGCTCAGGTGATGGAA GAGTTGGTGGAGATGGCTAAGAAGTTCAAGGAAGCCGTCAGCCGTGGCGAAGAGCTAGGCCTGAGTGAAGACGAAATCCG GTTCTACGATGCGCTTGCTACCAATGAGTCAGCAGTACGAGAACTGACAGACGAAACACTGAAAAAAATCGCTCACGAGC TCACGGAAAATCTACGCAAAAACATCACTGTCGACTGGTCAAAGCGCGAAAGTGTACGCGCCAGCCTACGGCTATTGGTC AGGAGGATATTGCGCAAATACAAGTATCCGCCTGATATGGCAGATACGGCTGTAGAGTTGGTGTTACAGCAAGCTGAAGT TTTGGGTGAGCAATGGAGTCATTGA Protein sequence : MTEDQLEQEALGWLADVGYTPRSGPDIAHDGSDPQRSGYTQVTLPQRLRDTIARLNPDIPAIARDEALKQVENLDTPVQL AANCAFHKLMVNGVPVQYQKDGETRGDLVRLVDWANPKNNEFWAVSQFTIKGPHHTRRPDIILFINGLPLVLLELKNAVN EGADIWKAYDQLQTYKAQIPDIFEYNEILVISDGSEARFGSLSANAERFMQWRTIDGVELDPLGQFNELETLVRGLLAPQ YLLDYLRYFVLFEDDGTLIKKIAGYHQYHAVRFAIEEVVRVSRPDVEKGKRGKGGVVWHTQGSGKSITMTCFAARVMQEP AMQNPTIVVITDRNDLDGQLFGVFSLSQDLLREQPVQATTRQQLRALLGNRPSGGIVFATIQKFMPGEDEDIFPELSDRS NIVVIADEAHRTQYSFEAKLKTRKNKAGNLATAYHLAPDNEPSTAFATELAGSEDYLSKYQTGYAQHLRDALPNATFVAF TGTPVSSTDRDTRSVFGNYIHVYDMQQAKEDGATVAIYYESRLAKLKLKETDLEAIDEEVDELAEDEEEQTQARLKSKWA ALEKVVGAEPRVASVAADLVEHFEERNKAQDGKAMAVGMSRDICVHLYNEIIKLRPDWHDEDPEQGTIKVIMTGSASDKA LLRPHIYSGQVKKRLEKRFKDPADPLKMVIVRDMWLTGFDAPCVHTMYIDKPMKGHNLMQAIARVNRVFRDKQGGLVVDY IGIGNELKAAMKEYTASKGRGKPTVDAYEALAVMLEKLDVLRAMLHGYDYSGFKTGGHKALAGAANHILSLRPPPGQKDA KLDGKKRFADAALALSKAFSLCCTLDEAKTLRDEVAFMQAVKVILTKRDISAQKKTDEQREIAIRQIINQAVVSESVVDI FDAVGLEKPNIGLLDDEFLAQVRNLPERNLAVELLERLLEGEIKSKFASNLVQQKKFSEMLSGVITRYQNRSIETAQVME ELVEMAKKFKEAVSRGEELGLSEDEIRFYDALATNESAVRELTDETLKKIAHELTENLRKNITVDWSKRESVRASLRLLV RRILRKYKYPPDMADTAVELVLQQAEVLGEQWSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 55 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
