Gene Information

Name : PT7_1815 (PT7_1815)
Accession : YP_004416979.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1931653 - 1932336 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATTGCTGTTGGTCGAAGACGAGACCAAAACCGGTGATTATGTACGCCAAGGGCTAGTCGAGTCCGGCTTCGTTGT
GGACCTCGTGCGCACTGGCTTGGACGGACATCATTTGGCCCTGACTGGCTCTTATGATTTGATTATCTTGGACGTTATGC
TGCCCGATGTGGACGGTTGGCGTATCGTCCAGGCTCTACGCGATGCGAAATCGTCGACGCCGGTATTATTTCTGACTGCC
CGGGATAGTGTAGAAGACCGCGTCAAAGGGCTGGAGCTGGGCGCAGACGATTACTTGGTAAAACCGTTCGCTTTTTCAGA
GCTCCTAGCGCGTGTACGTACGTTATTAAGGCGGGGCGCCGCTCCCGCCTTCCAGGATCAGTTACAGATCGCTGATCTCG
TTCTCGATATTCCTCGACGTCGAGCTCAGCGCAAAAGCGTGCGTATTAATCTTACGAACAAAGAGTTTGCCTTGTTGGAA
CTCTTGGTACGTCGTCAAGGCGAAGTACTGCCTCGCTCGTTGATTGCTTCCCAGGTGTGGGACATGAACTTTGACAGCGA
CACCAATGTCATTGATGTCGCGATCCGACGCCTGCGCGCCAAAATCGATGACGATTTTGATCCTAAGCTTATCCACACGG
TACGCGGCATGGGTTACATGCTGGACGTGACGCTCCCCGAATAG

Protein sequence : 
MKLLLVEDETKTGDYVRQGLVESGFVVDLVRTGLDGHHLALTGSYDLIILDVMLPDVDGWRIVQALRDAKSSTPVLFLTA
RDSVEDRVKGLELGADDYLVKPFAFSELLARVRTLLRRGAAPAFQDQLQIADLVLDIPRRRAQRKSVRINLTNKEFALLE
LLVRRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDDFDPKLIHTVRGMGYMLDVTLPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-60 60
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-60 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0083 Protein 4e-73 71
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0111 Protein 2e-78 70
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0197 Protein 6e-68 67
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0638 Protein 2e-64 67
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0308 Protein 2e-66 65
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0125 Protein 1e-65 64
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0347 Protein 4e-67 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG0596 Protein 4e-61 60
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG1389 Protein 1e-36 45
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG1390 Protein 3e-41 43
PT7_1815 YP_004416979.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG0473 Protein 3e-34 41