|
Name : PT7_1772 (PT7_1772) Accession : YP_004416936.1 Strain : Pusillimonas sp. T7-7 Genome accession: NC_015458 Putative virulence/resistance : Virulence Product : type IV secretion system protein VirB4 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 1893284 - 1895728 bp Length : 2445 bp Strand : + Note : - DNA sequence : ATGAATGCTGCTACCACCCTGGCCGTGGACGAACGGCGCGTCTCGCGCTATCTGCCCTACTCCCATCATGTCACCGACCA GATCATTGCCTGCGACAACCATGAATACCTGGCGGTCATAAAGGTAACGGGCCGTGCGCCGGATGCCTATGCACAAGATG AGCTGAAAGACTGGATCGAAGCACTGCATAACGTGCTACGCGGCTTGCCCATGGGATCGCTTGGCCTGTACTCCCACATC GTGCGCCGTCGCGTCACGGAATACCCCGACAGCGCTTTCAACCAGCCCTTTGCTTCCCGTTTCGATGCCGCCTACCGTGC CACGTTCGACGCCTCGGGCCTGATGATCAACGATCTATACCTGACAGTGCTCATTCATCCGGTACAGGATCCGATACTGG GCACATTCGCCAGCCTGGAAAAAGCCGACGCGCCACGCATTGCGCACTGGCAAGCCGAATCCATCGAACGCCTGAACGGC ATCATACGTGCCTTGAGCGCTGGCCTGTACCGCTACGATCCACAAACCCTGGGGATCGTAGATCGCAAGGGCTTTGCTTT TAGCGAAGCCGCCGAGTTCCTGGGATTTCTGCTTTCCGGTACGCACCGGCCCGTACCAATCAGCCGGGAACGCTTGCGTG ACACCCTGCCCTACGTCAGACCGATCTTTGGCCGTCATGGAGAATTGGGCGAACTGCGTGCCGTCGCCAGCTCCCGCGTC TTTGGCATGATGGAGCTACGCGACTACCCGGAAGCGACAAAACCGGGACACCTGGATCGGCTGCTGGGACTGCCCCACGA ATTCGTGCTCACTCAATCGTGGGGCAGCCATACCGGAGCGGCAGCCAAAAAGCTGGTCAAGAAGCATCACAAGTTGCTAG TCGATTCGGGCGATGATTCGATCAGCCAGGTCACCCAACTGACGGAGGCCATGGACGATCTGACATCAGCTCGCCTGGGC CTGGGCGACCATCACGCCACGATGCTGATTTATGGCGACACGGCTGAAGGGGTGCGCCAGGCCTTGGCCCAGACCGCCAC GGCGCTGGCCGAAGAGGCAGTCGGCTTCCGGCCACTGGATCGAGCCCTGGAAGCCGGGTTTTGGGCGCAACTGCCCGGTA ACTGGCACTGGCGGCCACGCCCGGTGCCCATCACATCGCTCAACTTCCTGTGCTTTTCCAGCCTACATAACCAGCTGACT GGCAAACCGGTCGGCAACCCCTGGGGGCCAGCGGTCACGCTGCTCAAAACCCAGACAGGCAGCCCGTTCTTCTTCAACTT TCACGCCTCTACTGAGGACTTGGACGAAACCGGAAAGCGTCGTCCGGGCAACACCATGATCATTGGGATGACCGGCACGG GTAAGACCGTATTGCAGGGAATGCTACTTACCCAGGCGCAGAAGTTCGGTGCAACGTGTGTTGTCTGGGACAAGGATCAG GGCATGCAGGTGCTCATCATGGCGCTGGGGGGCCGCTACTTCAACATCCGCCTGGGTGAAGCAACAGGCTGGAATCCGTT CCAGATGGAGCCCACCAAAGGCAACGTCGCCTTTATGGTGCGCCTGGTCGTATTTCTGGCCGAGCGCCGGGGCGAGGCAG TCACCACACGGCAGCAGGCAGATATTACCCAGGCCGTGCAACAGCTGACCACGCTGATCGACCGGGAGGCCCGCACGCTA TCGACCTTGAATACCTTGCTGCCCAACCCGTACAGCGACGATGAAACCACGAGCACCATCCATGCTCGCTTGGCACCGTG GTGCCAGGGCGGTGAATACGGCTGGGTGTTCGATAACCCTGCCGATGAACTGAGTCTAGCCACCGGCACGGGCAAACCCG CCATCTTCGGATTTGATCTGACCGAACTACTCGATGATGAGGCGGTACGGGGCGCAGCCACGATGTATCTGAAGCACCGC ATTGATGCCCTGCACGATGGCCGGCGCATCATCAACCTGTACGACGAATGCCAGCACCCATTAAAGGACAGACATTTTCA GGAAGACATGCAAGATGCCAGCCGCACCATCCGCAAGAAAAACGGCGTGTTGGCCTTCGCCACCCAGGAGCCGGGCGCTA TCACGGAAAACCCGGTCGGCCCCTCCCTGGTTCAGCAGACAGCCACCTTGATTCTGCTGCCCAACCCCAGAGCCAAGGCC CGCGACTACATCGAGGGCTTTGGCCTGTCACCCACTGAGTTCGAGTTATTGAAGTCTTTGGGCGAGGCCAGCCGAAAATT TCTCGTCAAGCAAGGTTCAAGTGTCACGGTCGCGCAACTGGACTTGTCCGGCTGCGAAAACGAATTGCTGGTGTTCTCTG GCAGCCCCGACATGGCGGAGATAGCTGAACATGCCGTGGCCCAGGCCGGGCATGATCCGGCCGCCTGGCTACCCGTGTAC CTGGACACCGTCAAGCAAAGCAGTCAGTTAACCGCCCTCTCATAA Protein sequence : MNAATTLAVDERRVSRYLPYSHHVTDQIIACDNHEYLAVIKVTGRAPDAYAQDELKDWIEALHNVLRGLPMGSLGLYSHI VRRRVTEYPDSAFNQPFASRFDAAYRATFDASGLMINDLYLTVLIHPVQDPILGTFASLEKADAPRIAHWQAESIERLNG IIRALSAGLYRYDPQTLGIVDRKGFAFSEAAEFLGFLLSGTHRPVPISRERLRDTLPYVRPIFGRHGELGELRAVASSRV FGMMELRDYPEATKPGHLDRLLGLPHEFVLTQSWGSHTGAAAKKLVKKHHKLLVDSGDDSISQVTQLTEAMDDLTSARLG LGDHHATMLIYGDTAEGVRQALAQTATALAEEAVGFRPLDRALEAGFWAQLPGNWHWRPRPVPITSLNFLCFSSLHNQLT GKPVGNPWGPAVTLLKTQTGSPFFFNFHASTEDLDETGKRRPGNTMIIGMTGTGKTVLQGMLLTQAQKFGATCVVWDKDQ GMQVLIMALGGRYFNIRLGEATGWNPFQMEPTKGNVAFMVRLVVFLAERRGEAVTTRQQADITQAVQQLTTLIDREARTL STLNTLLPNPYSDDETTSTIHARLAPWCQGGEYGWVFDNPADELSLATGTGKPAIFGFDLTELLDDEAVRGAATMYLKHR IDALHDGRRIINLYDECQHPLKDRHFQEDMQDASRTIRKKNGVLAFATQEPGAITENPVGPSLVQQTATLILLPNPRAKA RDYIEGFGLSPTEFELLKSLGEASRKFLVKQGSSVTVAQLDLSGCENELLVFSGSPDMAEIAEHAVAQAGHDPAAWLPVY LDTVKQSSQLTALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trwK | CAD42844.1 | TrwK protein | Not tested | trw-PAI | Protein | 2e-168 | 46 |
| trwK | YP_001610476.1 | TrwK protein | Virulence | Not named | Protein | 3e-168 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PT7_1772 | YP_004416936.1 | type IV secretion system protein VirB4 | VFG2259 | Protein | 2e-168 | 46 |
