Gene Information

Name : PT7_1088 (PT7_1088)
Accession : YP_004416252.1
Strain : Pusillimonas sp. T7-7
Genome accession: NC_015458
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 1197671 - 1198957 bp
Length : 1287 bp
Strand : -
Note : -

DNA sequence : 
GTGCTTGCAGCGCTATTGATTTTTATTGTCACCATCGTCCTGGTCATCTGGCAGCCGCGCGGCTTGAACATTGGCTGGAG
CGCTTTGATCGGTGCAACGCTAGCGCTGATTTTCGGTGTTGTCAGCTTCAGCGACATACCCGTGGTCTGGCAAATTGTCT
GGAATGCGACCGCCACTTTTGTGGCGATCATCATTATCAGTCTGCTCCTGGACGAAGCAGGTTTTTTTGAATGGACAGCG
CTGCATGTGGCCAGATGGGGCGGCGGTCATGGCCGGCGATTATTCGCACTGATTGTCTTGCTGGGGGCCGTGGTATCGGC
GTTCTTTGCCAATGACGGGGCCGCCTTGATTCTGACGCCCATTGTCATGGCCATGCTCTTGGCGTTGGGGTTCAGCCCTG
CGGCCACGCTGGCTTTTGTCATGGCGGCGGGCTTTATTGCCGACACGGCCAGTCTGCCGCTGGTCGTATCCAACCTGGTC
AATATTGTTTCGGCGGATTTCTTCGATATCAGCTTTGCCCGATATGCCGCGGTGATGGTTCCGGTCAACGTTGTTTCCGT
TGCCGCCACCTTGCTGGTTCTGCTGCTGTATTTTCACAGCAGCATTCCTGTTCGCTACGACGATAGCCAACTCAAGGAAC
CTAAAACGGCGATTCGCGATCTGGCGACCTTCCGCGCCGGCTGGGTGGTGCTGGGACTGCTATTGCTCAGCTTTTTTACG
CTTGAGGGTTTTGGCATCCCGGTTAGTGCCATCGCGGCCTTGGGTGCTATCGCGCTGCTTATCGTTGCGGGGCTTGGACA
CAAAATCAGTACACGCAAAGTCCTGCGGGAAGCGCCTTGGGCTATCGTCATATTCTCCCTTGGGATGTACTTGGTCGTTT
ATGGCTTGCGCAATGCAGGGTTGACGGAGATGATCGCCAGCTTGCTCGACTACCTGGCGGGCCATGGGGTGTGGGCGGCT
GCCTTGGGTACCGGGGTGCTGACTGCCCTGCTCTCGTCCATCATGAACAACATGCCAACCGTTTTGGTCGGGGCGCTATC
TATCGACGCCAGCCAAGCCACGGGCGTAGTCAAAGAAGCCATGATCTATGCCAATGTCATCGGTAGCGACTTGGGCCCCA
AAATCACCCCCATAGGCAGTCTGGCCACACTGCTGTGGCTGCACGTCCTGGCACGCAAGGGCATGACCATTACGTGGGGC
TATTACTTCAAAGTAGGTATCGTGCTGACTTTACCTGTATTGCTTGTTACCCTGGCGGCGCTTGCCGTGCGCTTGGGCGC
GTTATAA

Protein sequence : 
MLAALLIFIVTIVLVIWQPRGLNIGWSALIGATLALIFGVVSFSDIPVVWQIVWNATATFVAIIIISLLLDEAGFFEWTA
LHVARWGGGHGRRLFALIVLLGAVVSAFFANDGAALILTPIVMAMLLALGFSPAATLAFVMAAGFIADTASLPLVVSNLV
NIVSADFFDISFARYAAVMVPVNVVSVAATLLVLLLYFHSSIPVRYDDSQLKEPKTAIRDLATFRAGWVVLGLLLLSFFT
LEGFGIPVSAIAALGAIALLIVAGLGHKISTRKVLREAPWAIVIFSLGMYLVVYGLRNAGLTEMIASLLDYLAGHGVWAA
ALGTGVLTALLSSIMNNMPTVLVGALSIDASQATGVVKEAMIYANVIGSDLGPKITPIGSLATLLWLHVLARKGMTITWG
YYFKVGIVLTLPVLLVTLAALAVRLGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-109 74
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-89 58
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-91 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-90 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PT7_1088 YP_004416252.1 arsenical pump membrane protein BAC0578 Protein 7e-112 75
PT7_1088 YP_004416252.1 arsenical pump membrane protein BAC0576 Protein 3e-111 75
PT7_1088 YP_004416252.1 arsenical pump membrane protein BAC0031 Protein 2e-110 74
PT7_1088 YP_004416252.1 arsenical pump membrane protein BAC0577 Protein 2e-107 74
PT7_1088 YP_004416252.1 arsenical pump membrane protein BAC0574 Protein 1e-89 58
PT7_1088 YP_004416252.1 arsenical pump membrane protein BAC0575 Protein 2e-90 57