Gene Information

Name : Selsp_0896 (Selsp_0896)
Accession : YP_004413320.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Virulence
Product : Iron-chelate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 1001413 - 1002195 bp
Length : 783 bp
Strand : +
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: bcy:Bcer98_2406 ABC transporter-related protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase

DNA sequence : 
ATGTCTGTGACGGTTCGCCATCTTTCGGTGTCGCTCGCAGGAAAAACGATCCTGCACGATCTGAACGTCGAATTTCCCGT
CGGCAAGCGCACGGCGATCATCGGCCCGAACGGCGCGGGAAAATCGACGCTTCTGCGCGTGCTTGCCGCCTTGAATCCCA
AGTACGAGGGTGAGGTGCTGTTGGACGGCACAGACATCCATGCCATCCCTCGAAAATCGTTGGCGAAGCGCCTCGCCATC
CTGCCGCAGGGACTTGCTGCTCCGCCTGATCTCACGGTGGAGGCGCTCGTCGACTATGGCCGCTATCCGTACCGCAGCTG
GCGCACGATCGGCCGCTCGAAGGAAGATCGCGAGGCTGTCGCACAGGCGCTGGCCGAGACACGGATGGAAGCGATGCGCA
CCCGTCAGGTCATGTCGCTTTCGGGCGGCGAGCGTCAGCGCGCCTGGATCGCCATGGCGTTGGCTCGCCAGCCCGAATAC
CTGCTGCTCGATGAGCCGACGACATACCTCGACATTGCGCATCAGCTTGAAGTCATGGAAATCATCAAGCGGCTCAATCG
AGAGCATGCGATGACCGTCATCATGGTGCTGCATGACATCAACCATGCTTTGCAGTATGCGGACGAGATCGCCGTCATCA
AGGATCGGCAGATTTTCAGCACGGGAACGCCGCACGATGTGCTGAACGTCGCGATGCTTGCTGAGGTCTTCGGCGTGCGC
GCCGACATTTTTACCAATAGTCAAGGAGCGCAGGTGCTGTCGCCTGTTTCGCTCGTGCGGTAA

Protein sequence : 
MSVTVRHLSVSLAGKTILHDLNVEFPVGKRTAIIGPNGAGKSTLLRVLAALNPKYEGEVLLDGTDIHAIPRKSLAKRLAI
LPQGLAAPPDLTVEALVDYGRYPYRSWRTIGRSKEDREAVAQALAETRMEAMRTRQVMSLSGGERQRAWIAMALARQPEY
LLLDEPTTYLDIAHQLEVMEIIKRLNREHAMTVIMVLHDINHALQYADEIAVIKDRQIFSTGTPHDVLNVAMLAEVFGVR
ADIFTNSQGAQVLSPVSLVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-46 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-43 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-43 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-43 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-43 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-44 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-44 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selsp_0896 YP_004413320.1 Iron-chelate-transporting ATPase BAC0164 Protein 4e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selsp_0896 YP_004413320.1 Iron-chelate-transporting ATPase VFG1042 Protein 3e-44 41
Selsp_0896 YP_004413320.1 Iron-chelate-transporting ATPase VFG0925 Protein 1e-44 41