Gene Information

Name : Selsp_2114 (Selsp_2114)
Accession : YP_004414520.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2356758 - 2357237 bp
Length : 480 bp
Strand : -
Note : COGs: COG1576 conserved hypothetical protein; InterPro IPR016051:IPR003742; KEGG: vpr:Vpar_1261 protein of unknown function DUF163; PFAM: SPOUT methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase H; TIGRFAM: Ribosomal RNA lar

DNA sequence :
ATGAAGATCCGCATCGTCGCTGTGGGAAAGCTCAAGGAGAAGTACCTGAGGGAAGGCGTCGCTGAGTATGAGAAGCGCCT
CGCTCCGTTCGCTTCTGTGGAGCTTCTGGAAACGCGCGAAGAATACATGGCGGAAAATCCATCCGAAGCACAAAGGCAGC
AGACGCTCGCAAAAGAGGGCGAGCGTCTCTTGCGTCTCGTGCCGGAGAGGAGCTTCCTCATCGTGCTCGATGTCAAGGGG
AAGCTCCTTTCGTCGGAAGCGCTTGCAAAAGAGCTTGCCTCGCTCGCGCTTCAAGGGCAGAGCGACCTCACGTTCCTCAT
CGGCGGCGCGTTCGGCCTGTCGCCAGCGGTGCGAGATCGCGCCGATCTTAGAATTTCATTTTCGCCGATGACCTTCACGC
ATCAGATGGTGCGGCTCTTGCTCTACGAGCAGATTTATCGCGCGTTCAAGATCAACCGCGGCGAGAAGTATCATTGGTGA

Protein sequence :
MKIRIVAVGKLKEKYLREGVAEYEKRLAPFASVELLETREEYMAENPSEAQRQQTLAKEGERLLRLVPERSFLIVLDVKG
KLLSSEALAKELASLALQGQSDLTFLIGGAFGLSPAVRDRADLRISFSPMTFTHQMVRLLLYEQIYRAFKINRGEKYHW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 5e-33 56
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-33 56
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-32 54
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-31 52
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-31 52
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-31 52
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-31 52
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-31 52
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-31 52
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-31 52
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-31 52
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-31 52
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-31 52
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-31 52
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 3e-29 52
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-31 52
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 6e-31 52
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 7e-31 51