|
Name : Selsp_2054 (Selsp_2054) Accession : YP_004414460.1 Strain : Selenomonas sputigena ATCC 35185 Genome accession: NC_015437 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 2282317 - 2283642 bp Length : 1326 bp Strand : + Note : COGs: COG0305 Replicative DNA helicase; InterPro IPR007694:IPR007693:IPR007692; KEGG: tjr:TherJR_2972 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SPTR: Replicative DNA helicase; TIGRFAM: DNA he DNA sequence : ATGGATCGCATGCCGCCCGCAAGCATCGAGGCCGAGCAGGCCGTTCTCGGCGCAATGCTCTTAAAGCCCGACGCCGTGAC GACCGCCGCCGAAGAACTGTCGGCGGACGACTTCTATCGCGAGACACATCGGCTGATCTTCGAGGCCATGATGGAACTCA AGGAGCGCACGGAGCCTGTCGACCTCGTGACCTTGACCGAGCAGCTAAAGAAGGCAGACAAGCTCGCGAAGATCGGCGGC ATCCCCGCGCTGTCCCTGATCGCGAACTCCGTGCCGACGGCGGCGAACGTGCATTACCACGCGCGCATCGTGCATGAGAA AGCGCAGCTTCGCTCGCTGATCAACGCCGCGACGGAGATCGCGGGTGCCGCCTATGAGAGCGCCGACGAAGTCGAGGACA TCATGGACAGCGCGGAAAAGCGCATCCTAGCTGTCTCTTCGGGAAAGCGCAGCAAGGACTTCGTGCCGCTGCAGGACATT CTTCTCGACACCCTGGAGCAAATCGATCTGCGCTACAACAACAAGGGCAGCATCACGGGACTGCCGACAGGCTTCACGGA GCTTGACCATCTGACAGCGGGGCTGCAGAAATCCGACCTCATCCTCGTCGCCGCACGCCCCTCGATGGGCAAGACGGCAT TCACGCTCAACATCGCGGCGCACGTCGTACTGCGCGCGAAAGAGCCCGTCGCCTTCTTTTCCCTGGAAATGAGCAAGGAG CAGCTCGTGCAGCGTCTCCTGTGCTCGGAAGGGCGCATCGATTCGCAGCGCCTGCGCGTCGGCGAGCTTGAGGAAAAGGA GTGGGGCGACCTCATCGACACGGCGAACCGCCTTTCCGCCGCACCGCTCTACATCGACGACACGCCGGGCATCACCGTCA TGGAACTGCGCTCGAAAGCGCGCCGCCTGAAGGCCGAGCACGGGCTTTCGCTCATCGTCATCGACTATCTGCAGCTCATG CAGGGGCGGGGGAATAAGAGCGGCGACAACCGCCAGCAGGAGATCTCGGAGATCTCGCGCTCCTTGAAGGCGCTCGCGCG TGAGCTGAACGTGCCCGTCATCGCGCTCTCGCAGCTTTCGAGAAGCGTCGAGTCGCGCCAGATCAAGCGTCCGATGCTCT CCGACCTGCGCGAATCCGGCTCTTTGGAGCAGGACGCCGACATCGTCATGTTCCTCTACCGCGAGGACTACTACGATCCC GAAACGGAGAACAAGAACATCACGGAAGTCATCATCGCCAAGCACAGGAACGGCCCCGTCGACACCGTCGATCTCACGTT CCTCAAACAGTTTACGAAGTTCGGCAATCTCTCACGCATGCAATAG Protein sequence : MDRMPPASIEAEQAVLGAMLLKPDAVTTAAEELSADDFYRETHRLIFEAMMELKERTEPVDLVTLTEQLKKADKLAKIGG IPALSLIANSVPTAANVHYHARIVHEKAQLRSLINAATEIAGAAYESADEVEDIMDSAEKRILAVSSGKRSKDFVPLQDI LLDTLEQIDLRYNNKGSITGLPTGFTELDHLTAGLQKSDLILVAARPSMGKTAFTLNIAAHVVLRAKEPVAFFSLEMSKE QLVQRLLCSEGRIDSQRLRVGELEEKEWGDLIDTANRLSAAPLYIDDTPGITVMELRSKARRLKAEHGLSLIVIDYLQLM QGRGNKSGDNRQQEISEISRSLKALARELNVPVIALSQLSRSVESRQIKRPMLSDLRESGSLEQDADIVMFLYREDYYDP ETENKNITEVIIAKHRNGPVDTVDLTFLKQFTKFGNLSRMQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-87 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 9e-77 | 43 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 7e-74 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-78 | 42 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-78 | 42 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-77 | 41 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-70 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-70 | 41 |
