Gene Information

Name : Selsp_1900 (Selsp_1900)
Accession : YP_004414312.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno- octulosonatecytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 2094414 - 2095148 bp
Length : 735 bp
Strand : -
Note : COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR004528:IPR003329; KEGG: vpr:Vpar_0542 3-deoxy-D-manno-octulosonatecytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransfe

DNA sequence : 
ATGAGGACACTTTGCGTGATTCCGGCGCGCTATGCGTCGACGCGCCTGCCGGGCAAGCCGCTCGCCGACATCTGCGGCAA
GCCCATGATCTGCCGCGTCCTAGAGCGTGCGAGCCGCGCCCAAAAGCCTGAGAAGGTGATCGTGGCGACGGACGACGAGC
GCATCTACGATGCTGTGCGAGCGGAAGGCGGCGAGGCGCTCATGACGCGCGCCGACCATCCGACGGGCACCGATCGACTC
GCCGAGGTGGCAGAGGCATACCCTGAGGTCGACCTCATCGTCAACGTGCAGGGCGACGAGCCGCTGATCGAGCCTTCCGT
GATCGACGAGCTCATCGCGCCTTTCGAGATGGATGAGAATCTGCCGATGGCGACCGTCATGGTGCGCATGGACGACGCGG
CGGAGCAGCTCAATCCGAACAACGTCAAGGTCATTGTGGACAAGCTCGGCTACGCGCTCTACTTCTCGCGCTCGCTCGTG
CCCTATCCGCGTGCGGCGGCAGGCCCCGTGTACAAGCACATCGGCATCTACGCCTATCGGCGCGACTTTTTGCTGCGCTA
CGCACGCCTTGAGCCGACGCCGTTGGAGAGGGCGGAGTCGCTGGAGCAGCTTCGGGCGCTCGAAAACGGCTACGGCATCC
GCGTGCTGGAAACGGATTGCCGCTTCGTCGGCGTCGATACGCCGGAAGACCTCGCGCTCGTGAACAAGATTTATCGGGAG
CAGGGGCTGGCGTAA

Protein sequence : 
MRTLCVIPARYASTRLPGKPLADICGKPMICRVLERASRAQKPEKVIVATDDERIYDAVRAEGGEALMTRADHPTGTDRL
AEVAEAYPEVDLIVNVQGDEPLIEPSVIDELIAPFEMDENLPMATVMVRMDDAAEQLNPNNVKVIVDKLGYALYFSRSLV
PYPRAAAGPVYKHIGIYAYRRDFLLRYARLEPTPLERAESLEQLRALENGYGIRVLETDCRFVGVDTPEDLALVNKIYRE
QGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-42 52
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 9e-43 52
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-42 51