Gene Information

Name : Selsp_1885 (Selsp_1885)
Accession : YP_004414298.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Unknown
Product : Oligo-1,6-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.10
Position : 2080007 - 2081671 bp
Length : 1665 bp
Strand : +
Note : COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: bmd:BMD_3759 oligo-1,6-glucosidase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Oligo-1,6-glucosidase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR

DNA sequence :
ATGAAAGCAACGCATTGGTGGCAGAACACCGCCGTCTACCAGATTTATCCGAAGAGCTTCAACGACACGCGCGGCAAGGG
CACGGGCGATCTTCGCGGCATCACGGAAAAGCTCGACTATCTGAAGTCGCTCGGCGCGGGCGCGCTTTGGCTCACGCCCG
TCTACCCGTCGCCCATGGTCGACAACGGCTACGACATCAGCGACTATTGCGGCATCCATCCCGACTTCGGCACGCTCGCC
GATATGGAAGAGCTGATCGCCGAAGCGAAGAAGCGCGGCATGCGCATCGTCATGGATCTCGTCTACAACCACACCTCCGA
TGAGCACCCGTGGTTCTTGGAATCGAAGAAGAGCCGCACGAACGCGAAGAGCGATTGGTATATATGGCGCGACGCGAAGG
AGGACGGCAGCGCCCCGACGAACTGGCGCGGCATCTTCGGCGGTTCTGCGTGGACGTACAGCGAGGAGCGCGGCCAATAC
TACCTGCACACCTTCGCCGAGGCGCAGCCCGATCTCAACTGGGAGAACCCCGAGGTCAGAGAAGCGCTCTTCGCCGCCGC
AAACTTCTGGCTCGCAAAGGGCGTCGGCGGCTTCCGCATCGACGCCATCACCTACATCAAGAAGCCCGCCGTCTTCACGG
ACGGCGAGCCGGACGCGGCGGACGGCATGACGAGCGTCCACGATATGACGGCGAACACGCCGGGCATCCTCGACTTCCTG
CACGAGTTCCGCGCACGCGTCTTCGACGGGCACGACATCTTCACCGTCGGCGAGGCGAACGGCGTCACGCCCGAAGAACT
GCCGCTGTGGGTCGGCGAGAACGGCGTCTTCTCCATGCTCTTCGAGTTCAGCCACGTCCTCGTTCCCTACGAAGGCGGCG
AATGCTGGCACAAGGCACTTCCGTGGCCTCTAACGAAGCTCAAGCGCGCGCTCACGGCGAGCCAGCACGCCACCGCCAAG
GAAGGCTGGTTTCCCATCTACTTCGAGAACCACGACCGCGCACGCTCCGTCAACTACTTCTTCCCCAAGGGCGCGGACAA
GAAACTCGCGGCCAAAGCTCTCGCCGCCGTCCTCTTCACGCTGCGCGGCACGCCCTTCATCTACGAGGGCGAGGAACTCG
GCATGACGAACGTGGCTTGGGATTCCATCGACGCCTACGACGACATTTCGTCGCACGGCCAGTACGCGCTCGCTTTGGAA
GATGGCTTCTCCAAGGAGGAAGCGCTGGGCTTCGTCCACTTCAACAGCCGCGACAACGCACGCACGCCGATGCAGTGGAC
GGCAGAAAGACATGCGGGCTTCACGAGCGGCACGCCGTGGCTGCCCGTCAACGAGAACTATCGCACGCTCAACGCTGCCG
CCGAGGAAAAGGATACTGACTCCGTGCTGCACTTCTACCGCAAGCTCGCCAAGCTGCGTGAGACGATTCCTGCGCTTTTG
GACGGCGTATACGAAGAGCTTCTGGAAGAAAACGAACAGATCTATGCGTTCTCGCGCACACTGGGAAAGGCGCGCATCAA
GACGGCGGTCAACTTCAGCACGAAGGACGCGGCGCTTCCCGCAGACTTCCTTCGCGGCACGCGCCTTGCCGGAAGCTATG
CGGACGCGCCGACGACTTCGCTTCGTCCATTGGAAGCCGTGATTTACGAGGAGGAGATACAATGA

Protein sequence :
MKATHWWQNTAVYQIYPKSFNDTRGKGTGDLRGITEKLDYLKSLGAGALWLTPVYPSPMVDNGYDISDYCGIHPDFGTLA
DMEELIAEAKKRGMRIVMDLVYNHTSDEHPWFLESKKSRTNAKSDWYIWRDAKEDGSAPTNWRGIFGGSAWTYSEERGQY
YLHTFAEAQPDLNWENPEVREALFAAANFWLAKGVGGFRIDAITYIKKPAVFTDGEPDAADGMTSVHDMTANTPGILDFL
HEFRARVFDGHDIFTVGEANGVTPEELPLWVGENGVFSMLFEFSHVLVPYEGGECWHKALPWPLTKLKRALTASQHATAK
EGWFPIYFENHDRARSVNYFFPKGADKKLAAKALAAVLFTLRGTPFIYEGEELGMTNVAWDSIDAYDDISSHGQYALALE
DGFSKEEALGFVHFNSRDNARTPMQWTAERHAGFTSGTPWLPVNENYRTLNAAAEEKDTDSVLHFYRKLAKLRETIPALL
DGVYEELLEENEQIYAFSRTLGKARIKTAVNFSTKDAALPADFLRGTRLAGSYADAPTTSLRPLEAVIYEEEIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-99 41