|
Name : Selsp_0178 (Selsp_0178) Accession : YP_004412615.1 Strain : Selenomonas sputigena ATCC 35185 Genome accession: NC_015437 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.22 Position : 200490 - 201791 bp Length : 1302 bp Strand : + Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476:IPR014027:IPR001732:IPR014026; KEGG: cth:Cthe_2340 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose deh DNA sequence : ATGTTGGAGCTTTTGCACGATGGCAGGGCGAAGATCGCCGTCGTGGGACTGGGCTATGTCGGGCTGCCGCTCGCCGTGGC GTTTTCGAGGCATTTCAGCGTCATCGGCTATGACAGCGACGAGGAGAAGATCGCGGACTGCCGCGCGGGCAAAGATCCGA TGGGCGAGCTTGCCGCGGAAGAAGGCGCGGCGGAGCGCATTGACTTTACGGCGGATGCGGCGCGTCTGCGCATGGCGTCG TTCATCGTCGTCGCTGTGCCGACGCCGATCAAGGGCGACAAGACGCCCAATCTCAAGCCGCTGAAGAAGGCGACGCGCGT CATCGGCAGGCATCTGCAGCCGGGCAGCATCGTCGTCTACGAGTCTACCGTGTACCCGGGCGTGACGGAGGACATCTGCT GCACCATACTGGAAAGGGAATCGGGCATGCGGCGCGGCGAGTTCAAGATCGGCTATTCGCCCGAGCGCATCAATCCCGGC GACAAGGTGCATCGCTTGGAGAACATCGTCAAGATCGTTTCGGGCATGGACGAAGAGACGCTTGAAACGATCGCCGGAGT TTACGGCACGGTCGTCGAGACGCTGCATCGTGCGCCGTCGATTCGCGTGGCGGAGGCGGCGAAGGTCGCGGAGAACGCGC AGCGCGACATCAACATCGCCTTTATGAACGAGCTGGCTCTCGTCTTTCACCGCATGGACATCGACACTTCGGCTGTGGCG GATGCGATGGATACGAAGTGGAATGCGCTGGGCTTCCGTCCGGGACTCGTCGGCGGTCACTGCATCGGCGTCGATCCGTA CTACTTCATCTATCAGGCGCAGAATCTCGGCTATTATTCGCCGCTCATCTCGACGGGGCGGCGCATCAATGACGACATGA GCGGCTTCGTCGCCCATGCCGTCGTGCGCGAGCTTGTGCGTGCAAAGATCGATCTCGCCAAGGCGCGCGTCCATCTTTTC GGCATGGCGTTCAAGGAGAACTGCCCCGACACGCGCAATTCGCGCGCCGCCGACGTATATCGCATCTTGCAGGAGTACGA TCTGACGCTCGCCGCCGTCGATCCTGAGGTTGATGCGGCAGCTTTCCGCGTGGAATACGGCTTCAGCCTGGAGTCGCTGC ACGATGTGCAGGAGGCGGACGCCCTCGTCTTTCTCGTGGCGCATGAAGCCTTCGCCCGTCTGTCGTGGGAGGAACTGCGT GCGATGTGCCGCGCGGACGGGCCGCATCTGCTCGTCGATGTGAAGGGGATGTACTCGCGCGAGGAAGCGGAGCGCGAGGG CTTTTGCTATTGGCGTCTTTGA Protein sequence : MLELLHDGRAKIAVVGLGYVGLPLAVAFSRHFSVIGYDSDEEKIADCRAGKDPMGELAAEEGAAERIDFTADAARLRMAS FIVVAVPTPIKGDKTPNLKPLKKATRVIGRHLQPGSIVVYESTVYPGVTEDICCTILERESGMRRGEFKIGYSPERINPG DKVHRLENIVKIVSGMDEETLETIAGVYGTVVETLHRAPSIRVAEAAKVAENAQRDINIAFMNELALVFHRMDIDTSAVA DAMDTKWNALGFRPGLVGGHCIGVDPYYFIYQAQNLGYYSPLISTGRRINDDMSGFVAHAVVRELVRAKIDLAKARVHLF GMAFKENCPDTRNSRAADVYRILQEYDLTLAAVDPEVDAAAFRVEYGFSLESLHDVQEADALVFLVAHEAFARLSWEELR AMCRADGPHLLVDVKGMYSREEAEREGFCYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-89 | 46 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-83 | 46 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-83 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Selsp_0178 | YP_004412615.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 8e-84 | 46 |
