Gene Information

Name : Selsp_1699 (Selsp_1699)
Accession : YP_004414114.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Virulence
Product : ATPase, FliI/YscN family
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1864663 - 1866090 bp
Length : 1428 bp
Strand : -
Note : COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR003593:IPR004100:IPR000194:IPR005714:IPR 022425; KEGG: tjr:TherJR_1539 flagellar protein export ATPase FliI; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; AT

DNA sequence :
ATGAATGACTTGCAGGAAGCCTGCGCGGCTTCTGAATGGGAAACTTCATCATGGGAGGACGAGGCGCAGCCCGATGTCTT
TGACGACGGCGGCGACGCCGTCCTGACGGGCGATGGACATCTGCGCATCAACGTGCAGAAGTTTCTCGATGCCGCCGATG
CCTGCGAGTCGATCAAGATGAGCGGCAAGATCGTGCAGGTCATCGGACTCGTCATTGAGTCTGCAGGGCCAAACGTGAGC
ATGGGCGAGCTTTGCTATGTGAAGTCGCGCTTCCCGCATGTCGAGCCGATACCGGCAGAAGTCGTGGGCTTTCGCGACGG
TCATGTGCTCTTGATGCCCATTGGCGAGATGCAGGGAATCGGCCCTGGCTGTGAGGTCGTTTCGGCGCAGAAGACGCTGC
AGGTGCAAGTCGGTCCGGAGCTTCTGGGGCGTGTCCTCGACGGTCTCGGCGAGCCAATCGACGGCAAGGGGCCGCTCCTC
TGCAAGCACGAGTATCCGCTGCAGGCCGATCCGCCGTCGCCGCTCGAACGGCCGCGCATACGGGATTCGCTCTACGTCGG
CGTGCGTGCCATCGACGGGCTTATCACCCTCGGCGATGGGCAGCGCATCGGCATCATGGCGGGTTCGGGCGTGGGAAAAT
CGACGCTCCTTTCCATGATTGCGCGCAACACGGAAGCCGACATCAGCGTCATCGCACTCGTCGGCGAGCGTGGGCGCGAG
GTCAAGGAATTCATTGAGCGCGACCTCGGCGAGGAGGGCTTGAAGCGCTCCGTCGTCGTTGTCGCTACGTCGGACAAGCC
GGCGCTCGTGCGCATCAAGGGCGCGATGACGGCGACTGCCATCGCCGAGTACTTCCGCGACCAGGGGAAGCGTGTCGTGC
TCATGATGGATTCCGTCACGCGCTTTGCGATGGCGCAGCGCGAGGTCGGCCTGACGATCGGCGAGCCGCCCGCAACGCGC
GGCTATACGCCGTCCGTCTTCGCGCTGCTGCCGCGCCTTTTGGAGCGTGCAGGGACGAGCCGCAAGGGATCGATCACGGG
CATCTACACGGTGCTTGTCGATGGCGACGACATGAACGAGCCGATCGCCGACGCCGTGCGAAGCATCCTCGATGGTCACA
TCGTCCTGTCGCGCGCCATTGCCGCACAGAACCACTTCCCTGCCATCGACGTGCTCGCGAGCGTCTCGCGCGTCATGAAC
GAGGTCGTCGATGAGGCACACCTCAAGGCATCGCAGAACTTGCGCGCTTTGATGGCGGTCTATAAGGAAGCCGAGGATCT
CATTCACATCGGCGCCTATGTCAAGGGATCGAGTCAGAAGATCGATACGGCGGTCGCGAAGATCGACGCGATCAATGATT
TCCTGCGCCAGGGCGTATTCGAGCAGAGTTCCTATGAAGAAACGGAAAAGACGCTGGAGTCGATATGA

Protein sequence :
MNDLQEACAASEWETSSWEDEAQPDVFDDGGDAVLTGDGHLRINVQKFLDAADACESIKMSGKIVQVIGLVIESAGPNVS
MGELCYVKSRFPHVEPIPAEVVGFRDGHVLLMPIGEMQGIGPGCEVVSAQKTLQVQVGPELLGRVLDGLGEPIDGKGPLL
CKHEYPLQADPPSPLERPRIRDSLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVIALVGERGRE
VKEFIERDLGEEGLKRSVVVVATSDKPALVRIKGAMTATAIAEYFRDQGKRVVLMMDSVTRFAMAQREVGLTIGEPPATR
GYTPSVFALLPRLLERAGTSRKGSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRAIAAQNHFPAIDVLASVSRVMN
EVVDEAHLKASQNLRALMAVYKEAEDLIHIGAYVKGSSQKIDTAVAKIDAINDFLRQGVFEQSSYEETEKTLESI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-108 57
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-104 55
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-104 55
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-103 55
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-103 55
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-104 55
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-104 55
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-104 55
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-100 54
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-100 54
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-85 50
escN CAI43874.1 EscN protein Virulence LEE Protein 4e-87 50
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-87 50
escN AAC38383.1 EscN Virulence LEE Protein 1e-87 50
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-87 50
escN AAC31513.1 L0034 Virulence LEE Protein 1e-87 50
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-87 50
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-87 50
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-87 50
escN AAK26715.1 EscN Virulence LEE Protein 9e-87 50
escN AAL57542.1 EscN Virulence LEE Protein 9e-87 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-87 50
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-86 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-90 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-88 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-88 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-88 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-89 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-82 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-82 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-76 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-80 47
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 9e-79 47
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-79 47
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-79 47
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-82 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-83 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 4e-89 46
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-82 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 7e-86 45
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-67 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-73 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-73 44
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-72 43
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-72 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-72 43
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-72 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-73 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG2144 Protein 3e-114 58
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0390 Protein 2e-108 56
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0192 Protein 5e-110 56
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0048 Protein 5e-107 55
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0812 Protein 7e-88 50
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0730 Protein 7e-88 50
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0515 Protein 6e-89 50
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG2331 Protein 2e-92 49
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG1254 Protein 5e-99 49
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG2499 Protein 3e-94 48
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG0555 Protein 4e-72 43
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG1008 Protein 3e-70 42
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG2459 Protein 5e-72 42
Selsp_1699 YP_004414114.1 ATPase, FliI/YscN family VFG1778 Protein 2e-69 41