Gene Information

Name : Selsp_1552 (Selsp_1552)
Accession : YP_004413968.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Resistance
Product : Phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.28
Position : 1707266 - 1708006 bp
Length : 741 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: vpr:Vpar_1071 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type

DNA sequence :
ATGGAGCAAAAGGCGAAGGAAGAGCGAGCGGCGCAGGAAAAGGCGACGATCGAGCTTCGGGGCATCAAGAAACTCTATCC
GATGGGCGATCAAATCGTCGCCGCGCTCGCGGGCGTTGATCTTACGATACGAAAGGGCGAGTTCGCCGCCCTCATGGGGC
CGTCCGGCTCGGGCAAGTCGACGCTCATGAACATCCTCGGCTGCCTCGACCGCCCGACGGAAGGATCGTACAAGCTCGAC
GGCGAGGAGGTCGCGCACCTCTCGGACGACGCGCTCGCTCTCACGCGCAATAAGAAGATTGGCTTCGTATTTCAGAACTT
CAACCTGCTCTCGAAGAGCAGCGCTGCCGACAACGTCGCCCTGCCGCTCATCTATGCGGGCGTCGGAAGAGGCGAGCGGC
GCGAGCGCGCCATGCACCTCTTGGAAGCCGTCGGGCTTGCCGACCGTGCCGACCATCAGCCCAACGAGCTTTCGGGCGGT
CAGCGCCAGCGCGTCGCCATCGCGCGCGCCCTCGTCAACGATCCGCACATCGTCATGGCGGACGAGCCGACGGGCAATCT
CGACACGAAATCGACGCATGAGATCATGGAACTCTTCGAGAAGCTTCACGCCGCCGGACGCACGATCATCCTCGTCACGC
ACGAGCCGGACATCGCTGCCTGCGCGAGCCGTCAGCTTCTCGTGCGCGACGGACTCATCACGCGCGACGAGGGCAGGGGC
GTCAAGATGGATGTCGTATAG

Protein sequence :
MEQKAKEERAAQEKATIELRGIKKLYPMGDQIVAALAGVDLTIRKGEFAALMGPSGSGKSTLMNILGCLDRPTEGSYKLD
GEEVAHLSDDALALTRNKKIGFVFQNFNLLSKSSAADNVALPLIYAGVGRGERRERAMHLLEAVGLADRADHQPNELSGG
QRQRVAIARALVNDPHIVMADEPTGNLDTKSTHEIMELFEKLHAAGRTIILVTHEPDIAACASRQLLVRDGLITRDEGRG
VKMDVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selsp_1552 YP_004413968.1 Phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-58 57
Selsp_1552 YP_004413968.1 Phosphonate-transporting ATPase NC_008702.1.4606598. Protein 5e-49 54
Selsp_1552 YP_004413968.1 Phosphonate-transporting ATPase CP001581.1.gene798.p Protein 6e-37 42
Selsp_1552 YP_004413968.1 Phosphonate-transporting ATPase CP001581.1.gene598.p Protein 7e-36 41