Gene Information

Name : Selsp_1450 (Selsp_1450)
Accession : YP_004413867.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1604976 - 1606511 bp
Length : 1536 bp
Strand : -
Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313:IPR004365:IPR004364; KEGG: bmd:BMD_0098 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRN

DNA sequence :
TTGGCTGAGAACAAGCAGCAGGACGCGACGCAGAAGGAAGATCTGAACGATCTTATGCGCGTGCGCCGCGAGAAGATGGA
GAAGTTCCGCGAGATGGGCGTTGCGCCCTTTGGGCATCGCTACGAGGTCACGCGCCATGCGGACGAACTGCTCGCAGAAT
TCGCCTCGCTCGGCGAGGAGGCGGAGAGCGAGACAGAGGTCAGCATCGCCGGGCGTTTGATGGCAATCCGCGGTCATGGC
AAGGCGAGCTTCGCCGTGCTCATGGATCTTTCGGGCAAGATTCAGATTTATTTCAAACTTGATGTTCTGGGCGAGGAAAA
GTACAAGGAGTTTAAGCTCCTGGACATTGGCGACATCATCGGCGTTCGAGGCGTCGTCTTCCGCACGCGGCGCGGCGAGC
TCACGGTGCGCGTCGATGACTTCACGCTTCTCTCTAAGTCGCTGCGCCCGCTTCCCGAAAAGTTTCACGGGCTGAAGGAT
GTGGAAATGCGCTACCGCCAGCGCTACGTCGATCTCATCATGAATCCTGAGGTCAAGGATACGTTCATCGCGCGCACGAA
GATCATCCAGTCGATTCGCCGCTACCTCGACGAGCGCGGCTTCCTCGAAGTGGAGACGCCTGTGATGTCGACGATTGCGG
GCGGCGCGGCGGCGCGTCCCTTCGTGACGTATCACAACGCGCTCGACATGAAGCTTTACCTGCGCATTGCGACGGAGCTG
AATCTCAAAAGGCTCATCGTCGGCGGCTTGGAGCGCGTCTACGAAATCGGGCGCATTTTCCGCAACGAGGGCATCGACGT
GCGCCACAACCCTGAGTTCACATCCATTGAGATTTATCAGGCGTATGCCGACTACAACGATCTCATGGACGTGACGGAGG
GGATATGCTGCCAGGCCGCGAAGGACGTGCTCGGTACGACGGCGCTGACCTACGAGGGTACGGAGATCGACCTCTCGAAG
ATTCGCCGCATCAGCATGAACGACGCCGTGAAAGAAGCGACGGGCAAGGACTTCATGAGCGCCCAAACCGTCGAAGAGGC
GCGTGCCATGGCGGATGCGATCGGCGTCGCCTACGAGGAGAAGCACGGCATCGGCGGCATCTTGAATGAGGCGTTCGAGG
CGAAGGTCGAAGAGTCCTTGATCCAGCCGACGTTCATCACGGGTCATCCGACGGAGATCTCGCCCTTGGCGAAGCGCAAT
CCCGAAGATCCGCGCATCACCGATCGCTTCGAGTTCTACGTCTACGGGCGCGAACTTGCGAACGGCTTCACGGAGCTCAA
CGATCCGATCGATCAGAAGGAGCGCTTCCTTGAGCAGGTGAAGCAGCGCGAAGCTGGCGACGACGAGGCGCACCCGATGG
ACAGCGACTTCATCACGGCTATGGAATACGGCTTGCCGCCGACGGGCGGCCTCGGCATCGGCATCGATCGTCTCGTGATG
CTCCTGACGGACAGCTCGTCGATCCGCGACGTGCTCTTCTTCCCGCACATGCGTCCTGAGGCCGCATCGCGTGCGCAGGA
GAGTGCGGCCGAGTAA

Protein sequence :
MAENKQQDATQKEDLNDLMRVRREKMEKFREMGVAPFGHRYEVTRHADELLAEFASLGEEAESETEVSIAGRLMAIRGHG
KASFAVLMDLSGKIQIYFKLDVLGEEKYKEFKLLDIGDIIGVRGVVFRTRRGELTVRVDDFTLLSKSLRPLPEKFHGLKD
VEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETPVMSTIAGGAAARPFVTYHNALDMKLYLRIATEL
NLKRLIVGGLERVYEIGRIFRNEGIDVRHNPEFTSIEIYQAYADYNDLMDVTEGICCQAAKDVLGTTALTYEGTEIDLSK
IRRISMNDAVKEATGKDFMSAQTVEEARAMADAIGVAYEEKHGIGGILNEAFEAKVEESLIQPTFITGHPTEISPLAKRN
PEDPRITDRFEFYVYGRELANGFTELNDPIDQKERFLEQVKQREAGDDEAHPMDSDFITAMEYGLPPTGGLGIGIDRLVM
LLTDSSSIRDVLFFPHMRPEAASRAQESAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-102 49
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-81 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selsp_1450 YP_004413867.1 Lysyl-tRNA synthetase VFG1668 Protein 9e-103 49