|
Name : Selsp_1450 (Selsp_1450) Accession : YP_004413867.1 Strain : Selenomonas sputigena ATCC 35185 Genome accession: NC_015437 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1604976 - 1606511 bp Length : 1536 bp Strand : - Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313:IPR004365:IPR004364; KEGG: bmd:BMD_0098 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRN DNA sequence : TTGGCTGAGAACAAGCAGCAGGACGCGACGCAGAAGGAAGATCTGAACGATCTTATGCGCGTGCGCCGCGAGAAGATGGA GAAGTTCCGCGAGATGGGCGTTGCGCCCTTTGGGCATCGCTACGAGGTCACGCGCCATGCGGACGAACTGCTCGCAGAAT TCGCCTCGCTCGGCGAGGAGGCGGAGAGCGAGACAGAGGTCAGCATCGCCGGGCGTTTGATGGCAATCCGCGGTCATGGC AAGGCGAGCTTCGCCGTGCTCATGGATCTTTCGGGCAAGATTCAGATTTATTTCAAACTTGATGTTCTGGGCGAGGAAAA GTACAAGGAGTTTAAGCTCCTGGACATTGGCGACATCATCGGCGTTCGAGGCGTCGTCTTCCGCACGCGGCGCGGCGAGC TCACGGTGCGCGTCGATGACTTCACGCTTCTCTCTAAGTCGCTGCGCCCGCTTCCCGAAAAGTTTCACGGGCTGAAGGAT GTGGAAATGCGCTACCGCCAGCGCTACGTCGATCTCATCATGAATCCTGAGGTCAAGGATACGTTCATCGCGCGCACGAA GATCATCCAGTCGATTCGCCGCTACCTCGACGAGCGCGGCTTCCTCGAAGTGGAGACGCCTGTGATGTCGACGATTGCGG GCGGCGCGGCGGCGCGTCCCTTCGTGACGTATCACAACGCGCTCGACATGAAGCTTTACCTGCGCATTGCGACGGAGCTG AATCTCAAAAGGCTCATCGTCGGCGGCTTGGAGCGCGTCTACGAAATCGGGCGCATTTTCCGCAACGAGGGCATCGACGT GCGCCACAACCCTGAGTTCACATCCATTGAGATTTATCAGGCGTATGCCGACTACAACGATCTCATGGACGTGACGGAGG GGATATGCTGCCAGGCCGCGAAGGACGTGCTCGGTACGACGGCGCTGACCTACGAGGGTACGGAGATCGACCTCTCGAAG ATTCGCCGCATCAGCATGAACGACGCCGTGAAAGAAGCGACGGGCAAGGACTTCATGAGCGCCCAAACCGTCGAAGAGGC GCGTGCCATGGCGGATGCGATCGGCGTCGCCTACGAGGAGAAGCACGGCATCGGCGGCATCTTGAATGAGGCGTTCGAGG CGAAGGTCGAAGAGTCCTTGATCCAGCCGACGTTCATCACGGGTCATCCGACGGAGATCTCGCCCTTGGCGAAGCGCAAT CCCGAAGATCCGCGCATCACCGATCGCTTCGAGTTCTACGTCTACGGGCGCGAACTTGCGAACGGCTTCACGGAGCTCAA CGATCCGATCGATCAGAAGGAGCGCTTCCTTGAGCAGGTGAAGCAGCGCGAAGCTGGCGACGACGAGGCGCACCCGATGG ACAGCGACTTCATCACGGCTATGGAATACGGCTTGCCGCCGACGGGCGGCCTCGGCATCGGCATCGATCGTCTCGTGATG CTCCTGACGGACAGCTCGTCGATCCGCGACGTGCTCTTCTTCCCGCACATGCGTCCTGAGGCCGCATCGCGTGCGCAGGA GAGTGCGGCCGAGTAA Protein sequence : MAENKQQDATQKEDLNDLMRVRREKMEKFREMGVAPFGHRYEVTRHADELLAEFASLGEEAESETEVSIAGRLMAIRGHG KASFAVLMDLSGKIQIYFKLDVLGEEKYKEFKLLDIGDIIGVRGVVFRTRRGELTVRVDDFTLLSKSLRPLPEKFHGLKD VEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETPVMSTIAGGAAARPFVTYHNALDMKLYLRIATEL NLKRLIVGGLERVYEIGRIFRNEGIDVRHNPEFTSIEIYQAYADYNDLMDVTEGICCQAAKDVLGTTALTYEGTEIDLSK IRRISMNDAVKEATGKDFMSAQTVEEARAMADAIGVAYEEKHGIGGILNEAFEAKVEESLIQPTFITGHPTEISPLAKRN PEDPRITDRFEFYVYGRELANGFTELNDPIDQKERFLEQVKQREAGDDEAHPMDSDFITAMEYGLPPTGGLGIGIDRLVM LLTDSSSIRDVLFFPHMRPEAASRAQESAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-102 | 49 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Selsp_1450 | YP_004413867.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 9e-103 | 49 |
