Gene Information

Name : Selsp_1347 (Selsp_1347)
Accession : YP_004413765.1
Strain : Selenomonas sputigena ATCC 35185
Genome accession: NC_015437
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1506846 - 1507247 bp
Length : 402 bp
Strand : -
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: dsy:DSY2197 hypothetical protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; IMG ref

DNA sequence :
ATGAACCACTTCGTAGGAATCGGACGCCTGACACGCGATCCTGATGTGCGATACACGCAGAGCGGCAAGGCAGTCGTGAG
CTTTACGCTGGCGATTGACCGCCGCAGGAGCGGGGATGGCAATCAACAGGCGGACTTCGTCGCCTGCGTCGCATGGGAGA
AGACCGCCGAGGTTATCAGCCGGTATTGCACGAAGGGAAAGAAGATCGCCGTCGAGGGACGCATCCAGACACGCAGCTAC
GAGGCAAAGGACGGGACGAAACGCTATGCGACGGAGGTCGTGGTCAATAACATGGAGTTCTGCGACAGCAAGGGCGGCGG
TACGAGTTCCACAGCACCACCCGAGCAGCAGGGCATGTTTGAGGGGAGCAGAGCGGTGGCCGACTCTGATATACCATTTT
GA

Protein sequence :
MNHFVGIGRLTRDPDVRYTQSGKAVVSFTLAIDRRRSGDGNQQADFVACVAWEKTAEVISRYCTKGKKIAVEGRIQTRSY
EAKDGTKRYATEVVVNNMEFCDSKGGGTSSTAPPEQQGMFEGSRAVADSDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-23 44
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-23 44
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-19 43
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 7e-19 43
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 7e-19 43
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-20 43
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 1e-20 42
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-20 42
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 6e-19 42
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-18 42
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-21 42
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-21 42
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-21 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-21 41