|
Name : Selsp_1183 (Selsp_1183) Accession : YP_004413602.1 Strain : Selenomonas sputigena ATCC 35185 Genome accession: NC_015437 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.3 Position : 1327419 - 1329410 bp Length : 1992 bp Strand : + Note : COGs: COG0021 Transketolase; InterPro IPR005478:IPR005476:IPR005475:IPR005474; KEGG: csh:Closa_0072 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Formaldehyde transketolase DNA sequence : ATGGGCAATATCGACACCACCTGTGTGAATGCGATCCGTGCACTTTCGGCGGACGCCGTGCAGAAGGCGAACTCCGGCCA TCCGGGCCTGCCGCTCGGCGCAGCCCCGATCGCTTACGAACTCTGGGCGCACCACATGAAGCACAACGGCAAGAATCCAA ACTGGGCGAACCGCGACCGCTTCATCCTCTCCGCCGGGCACGGCTCCGCCATGCTCTATTCCCTGCTGCACCTCTTCGGC TACGGGCTGACGCTCGACGACCTCAAGAACTTCCGCCAGGACGGATCCTTGACGCCTGGCCATCCCGAGTACCGTCATAC GAAGGGCGTGGAAGCCACGACAGGGCCTCTGGGCGCAGGCATGGGCATGGCGGTCGGCATGGCGATTGCTGAAGCGCACC TCGCCGCCATCTTCAACAAGCCGGATTTCCCCATCGTCGATCACTACACCTTTGCCCTTGGCGGCGACGGCTGCATGATG GAGGGCATCTCCTCCGAAGTCTTCTCGCTCGCGGGCACGCTCGCGCTCGACAAGCTCATCGTGCTCTACGACAGCAACAA CATCTCCATCGAGGGCGGCACCGACCTCGCCTTTACCGAAAACGTGGAAAAGCGCATGGCGGCCTTCGGCTTCCAGACGC TCACGGTCGAGGACGGTACGGATCTCGCCGCCATCGGCAAGGCGATCGAAGAGGCGAAGGCAGACAAGAAGCGGCCGTCC TTCATCACGATCAAAACGAAGATCGGCTTCGGCTGCCCCGCCAAAGAAGGCAAGGCGAGCGCCCACGGCGAACCGCTCGG CGAAGAAAACCTGCGCGCGCTCAAGGAAAACCTCGGCTGGGAAAATCCTGCCGAGAGCTTCTGCGTTCCTGCCGCCGTCT ACGAACATTACGAGAAGCTCGCCGCTGAGGGAGCGGCTCTTGAGGCGAAGTGGAACGAGCTTTTTGCCGCCTACTGCGCG AAGTACCCCGAGGAGAAGGCTCGCTGGGATGCGTTCCACGCGCCTGTCGATGCTGCGGCGCTGCTCAAGAGCGAGGACTT CTGGGCGTACGAGGACAAGCCCGCCGCGACGCGCGCCTTGTCGGGCAAGATGATCCAGCGTCTCAAGGAAATCGTGCCGC AGCTCATCGGCGGCAGCGCAGATCTCGGGCCGTCGAACAAGACCGTGATGGACGGCGCAGGCGATTTCAGCCGCACGGAT CGTGCGGGACGCAACCTGCACTTCGGCGTGCGCGAACTCGGCATGGCGGCGATCGCCAACGGCCTCGCGCTGCACGGCGG CGTCCTGCCTTACATCGCGACCTTCTTCGTATTCAGCGATTACACGAAGCCCATGCTGCGCCTCGCCGCACTCATGGGGC TGCCCGTCGTCTACGTGCTCACGCACGACAGCATCGGCGTCGGCGAAGACGGTCCGACACACGAGCCGATCGAGCAGCTT GCCATGCTGCGCTCGACGCCGAATGTCAACGTCTTCCGCCCTGCCGACGCGACGGAAACGGCCGCCGCTTGGTACAGCGC CGTGACGAGCAAGGATGCGCCAACCGTCCTCGCGCTCACGCGCCAGAATCTGCCGCAGCTTGCAGGAAGCTCCAAGGAAG CCATGAAGGGCGGCTACATCATTTCCGAAGCAAAGGGGGCACCGCAGGGCATCCTCATCGCCACCGGCTCTGAGGTATCG CTCGCCATCGAGGCGCAGGAAGAACTCGCCAAAGACGGCATCGCCGTGCGCGTCGTCTCCCTGCCGTCCGTCGACGTCTT CGAGCAGCAATCCGCTGAATACAAGGAAAGCGTCCTGCCGAAATCCATCCGCGCCCGCGTCGCCGTCGAAGCGGCCGTTG GCTTCGGCTGGGAACGCTACACAGGACTCGACGGTGCGACCGTCACGATGCACAGCTTCGGCGCTTCCGCCCCCGCCGGC GTCCTCTTCAAGAAGTTCGGCTTCACGAAGGAAAACGTCGTCGCGACGATGAAGAAGGTTCTGGAAAAATAA Protein sequence : MGNIDTTCVNAIRALSADAVQKANSGHPGLPLGAAPIAYELWAHHMKHNGKNPNWANRDRFILSAGHGSAMLYSLLHLFG YGLTLDDLKNFRQDGSLTPGHPEYRHTKGVEATTGPLGAGMGMAVGMAIAEAHLAAIFNKPDFPIVDHYTFALGGDGCMM EGISSEVFSLAGTLALDKLIVLYDSNNISIEGGTDLAFTENVEKRMAAFGFQTLTVEDGTDLAAIGKAIEEAKADKKRPS FITIKTKIGFGCPAKEGKASAHGEPLGEENLRALKENLGWENPAESFCVPAAVYEHYEKLAAEGAALEAKWNELFAAYCA KYPEEKARWDAFHAPVDAAALLKSEDFWAYEDKPAATRALSGKMIQRLKEIVPQLIGGSADLGPSNKTVMDGAGDFSRTD RAGRNLHFGVRELGMAAIANGLALHGGVLPYIATFFVFSDYTKPMLRLAALMGLPVVYVLTHDSIGVGEDGPTHEPIEQL AMLRSTPNVNVFRPADATETAAAWYSAVTSKDAPTVLALTRQNLPQLAGSSKEAMKGGYIISEAKGAPQGILIATGSEVS LAIEAQEELAKDGIAVRVVSLPSVDVFEQQSAEYKESVLPKSIRARVAVEAAVGFGWERYTGLDGATVTMHSFGASAPAG VLFKKFGFTKENVVATMKKVLEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-133 | 50 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-130 | 50 |
