Gene Information

Name : Spico_0647 (Spico_0647)
Accession : YP_004411257.1
Strain : Sphaerochaeta coccoides DSM 17374
Genome accession: NC_015436
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 749678 - 750607 bp
Length : 930 bp
Strand : -
Note : COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: ssm:Spirs_1553 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: DNA integrat

DNA sequence : 
ATGCCCTCATCTGCCATATCCCAGCTTCTTGAAGAATACCGCGAGCATCTGCTGCTTGAGCGGCGGCTTAGTCCGGCTAC
TGTGAATGTGTATGTGCCTGTGGTACGAGAATACGTCAGTTTCCTGGAAACACGGGGCATTGGTGCGGAGGAAGCGCAGG
CGGATACAATCAGCGGGTATTTTATCCACAAGGGACAGGCGGGTCTTGGTACTCGGACATTGGCACGGAATATGTCTGCA
CTGCGTTCATTTCATCGTTTCCTGCTGCTGAATGACATTAGGAATGATAATCCCTTTGAACTTCTTGACAGCCCGAAACT
GCCCCGTACCCTGCCACGGACCATGGACTATGATTCGGTGGATGATATTCTGCATGAAATGGAACTGGACGATGCTATAT
ATGCACGACGGGATAGAGCCATCTTTGAAGTCATCTATTCCTGCGGACTACGTGTCAGTGAGTTGGCGTCATTGAGGATT
GAGGATTATTCACCTGAATCCCGATTACTCAGAATCACGGGCAAGAGAAACAAGCAGCGGATAGTCCCGGTAGGAGATGT
CGCCGCGGAGCTCATTGATGAATATATTATTTCAGTGCGTCCTGCTTTCATTCCCAAAGGTCGTAGCTCTCGTTTTCTTT
TTCTTAATCGCTACGGGCAATCCTTGTCACGTGTCATGATTTGGAAGCTTTTCAAGAAATATTGCATGCGCATCGGAGTT
GAAGCAAAAGTACACACCTTGCGTCATAGCTACGCCACGCATCTTCTGAAGGCTGGAGCTGATTTGCGCAGCGTCCAGGA
ACTGCTGGGACATAGCGATATCCGCACTACGCAGATTTATACTCATGTAGATACGACGGACCTTCAAGAACAGTTCAGGC
GTTTTCATCCTGACGCAGGTCAGTCGGAGAATGAACAGCACGAAGCATGA

Protein sequence : 
MPSSAISQLLEEYREHLLLERRLSPATVNVYVPVVREYVSFLETRGIGAEEAQADTISGYFIHKGQAGLGTRTLARNMSA
LRSFHRFLLLNDIRNDNPFELLDSPKLPRTLPRTMDYDSVDDILHEMELDDAIYARRDRAIFEVIYSCGLRVSELASLRI
EDYSPESRLLRITGKRNKQRIVPVGDVAAELIDEYIISVRPAFIPKGRSSRFLFLNRYGQSLSRVMIWKLFKKYCMRIGV
EAKVHTLRHSYATHLLKAGADLRSVQELLGHSDIRTTQIYTHVDTTDLQEQFRRFHPDAGQSENEQHEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-44 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-44 44