Gene Information

Name : Spico_0644 (Spico_0644)
Accession : YP_004411254.1
Strain : Sphaerochaeta coccoides DSM 17374
Genome accession: NC_015436
Putative virulence/resistance : Unknown
Product : ATP-dependent protease hslV
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 747152 - 747685 bp
Length : 534 bp
Strand : -
Note : COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease, HslV subunit; InterPro IPR001353:IPR022281; KEGG: sta:STHERM_c09050 ATP-dependent protease HslV; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent

DNA sequence :
ATGAGTTTCAAAGGAACAACGATCATTGCGGTCCGTAGAGGCGGTCATGTTGCCATTGCCGGAGACGGTCAAGTCACAGC
CGGGGATACGGTCATGAAAGGCAATGCCCGGAAAGTGAGGACCTTGTATGATGGAAAAATCATCATCGGCTTTGCCGGTG
CTACAGCGGATGCTTTTACGCTTTTCGAATTATTCGAGACAAAATTGAAAAAGTTCAACGGAGACCTGACACGTGCCGCC
GTCGATCTCGCCAAGGAATGGAGGATAGACAGGAATCTCAGGCGTCTGGAAGCTATGATGCTGGCCAGTGATGGTTCAAA
GATATTCCTCATCAGCGGGACAGGTGACGTGTTGGAGCCTGAATATGATGCGATTGGGATTGGAAGTGGTGGTTCGTATG
CTTATGCCGCCGCACGTGCCTATCTTGATTCAGACACAAGTTCATCCGCAGAGGAAATAGCAAGAAAGAGTCTTGAGATT
GCAGCACACATCTGCATTTATACCAATACATCAATCAACGTGGAGGTTCTTTGA

Protein sequence :
MSFKGTTIIAVRRGGHVAIAGDGQVTAGDTVMKGNARKVRTLYDGKIIIGFAGATADAFTLFELFETKLKKFNGDLTRAA
VDLAKEWRIDRNLRRLEAMMLASDGSKIFLISGTGDVLEPEYDAIGIGSGGSYAYAAARAYLDSDTSSSAEEIARKSLEI
AAHICIYTNTSINVEVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 4e-28 47