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Name : Spico_0343 (Spico_0343) Accession : YP_004410955.1 Strain : Sphaerochaeta coccoides DSM 17374 Genome accession: NC_015436 Putative virulence/resistance : Unknown Product : L-ribulose 5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 392471 - 393166 bp Length : 696 bp Strand : + Note : COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: cpf:CPF_0648 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-ribulose-5-phosphate 4-epimerase; SPTR: L-r DNA sequence : ATGCTTGAAAAACTGAAAAAAGAAGTATGTTATGCCAACCAGAGTTTGCCCCGGTATCATCTGGTGACATTCACGTGGGG AAACGTTTCCGCGTATGATGTGAAAAGTGGGCTGATGGTCATTAAGCCGTCCGGCGTGGAGTACGACACCATGGAACCGG AGCAGATGGTCGTGATGGAAGTGTCCACGGGACGAAAGGTTGAAGGATTGCTGAAACCTTCTTCTGATGCTCCGACGCAT ATGGAATTATACAAGACGTTTCCCGGAATCGGAGGCATCACGCATACCCACAGCAGATGGGCGACTATCTTTGCCCAGGC TGGTCGGGGCATTCCGGCTTACGGTACGACCCAGGGAGATTATTTCTACGGGGAAATCCCCTGTACGCGAAAGATGACTC CGGCAGAAATCAGAGGTGAATACGAGAAGGAAACCGGGACAGTCATCATTGAGGCATTCAAAGAACTTGACCCATTATCT GTTCCTTCTGTCTTGGTTCACAGCCATGGCCCTTTCAGTTGGGGGAAGGATGCCCAGGAATCGGTACATAATGCTGTTGT CATGGAAGAATGTGCCATGATGGCGTGGCATGCGTTCATGCTTTCCGGAGGACATCTTGACCCGATGCAGCAGGAACTGT TGGACAAGCACTACCGGCGCAAGCATGGCAAGGACGCGTACTATGGTCAGAAATAG Protein sequence : MLEKLKKEVCYANQSLPRYHLVTFTWGNVSAYDVKSGLMVIKPSGVEYDTMEPEQMVVMEVSTGRKVEGLLKPSSDAPTH MELYKTFPGIGGITHTHSRWATIFAQAGRGIPAYGTTQGDYFYGEIPCTRKMTPAEIRGEYEKETGTVIIEAFKELDPLS VPSVLVHSHGPFSWGKDAQESVHNAVVMEECAMMAWHAFMLSGGHLDPMQQELLDKHYRRKHGKDAYYGQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 6e-55 | 54 |
