Gene Information

Name : Spico_0266 (Spico_0266)
Accession : YP_004410878.1
Strain : Sphaerochaeta coccoides DSM 17374
Genome accession: NC_015436
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 293564 - 295090 bp
Length : 1527 bp
Strand : +
Note : COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: mla:Mlab_1574 hypothetical protein; PFAM: Catalase-related subgroup; Catalase-related immune responsive; PRIAM: Catalase; SPTR: Catalase; IMG reference gene:2503956535; PFAM: Catalase; Catalase-r

DNA sequence :
ATGGAAAAGGACAAGTTCAAGAAACTGACCAATGAAGTCGGCGCTCCCGTTGCGGATAACGAGAACGCGATTACCGCAGG
CCCTCGCGGCCCGGTTGTCATGCAAGACGTATGGCTGATGGAAAAAATGGCGCACTTCAACCGTGAAGTCATACCAGAAA
GAAGGATGCATGCAAAGGGGTGGGGTGCATACGGAAAACTTACCGTGAAAAAAGACATATCGAAGTATACGAAAGCAAAA
GTACTTCAACCTGGTACGACGACGGATTTGTTCATTCGCTTTTCTACTGTCGCGGGGGAACGTGGCGCGGCAGATTGTGA
ACGTGATATCAGGGGTGTCGCCGTCAAGTTTTATACAGAGGAAGGCAACTGGGATCTCGTAGGCAACAACACTCCTACGT
TTTTCATCCGCGATGTCCACAATTTCTCTGATTTAAACCGGGCGGTCAAAAGAGATCCCCGTACCGGCCGCAGGTCAGCG
CAGAATAACTGGGACTTCTGGACGCTTCTTCCGGAGTGCTTCCATCAGATTACGATTGTCATGAGTGACAGAGGCATCCC
CGCATCCTTCCGGAACATGCATTTCTTCGGGGAGCATACTTTTTCTTTCTACAATGCCAAGAGTGAAAGAGTGTGGTGTA
AATTCCATTTTAAGACACAGCAGGGGATTAAGAATCTCAGCAATGAAGAAGCTACAAAAATCAATGGTATGGATCGTGAA
TATCATGGAAAAGATTTGTACGATGCCATCGAACGAGAAGATTTCCCCAAATGGACAATGTATGTCCAAATCATGACGGA
GAAGCAAGCCAAAGGACATCATGAGAATCCTTTTGACATTACAAAAGTATGGAGCCATAAGGAATATCCGCTTATTGAAG
TAGGCGAACTTGAGTTGAACCGCAATCCGGAGAACTATTTTGCGGAAGTTGAGCAGGCGGCTTTTACTCCCGCGCACGTT
GTGCCAGGCATCGGCTTCAGCCCTGACCGTTTCCTCCAAGGACGGCTGTTCTCCTATGGTGATGCGCAGCGGTATCGCCT
GGGAGTCAACCATAACCTGATTCCAGTCAACAAAGCACGTGTGGAGACGAACGATTACCATAGAGATGGTTCCATGAGGG
TCGATGGCAACTACGGCGGTGCTCCGGCGTATACCCCGAACAGTTATGGGGTGTGGACTGCCCAGCTTGAAGTATCGGAA
CCTCCTTTGGATTTGGAAGGAGCCATGTATCGCTATGATCCCAAGGATGATCCGACTGACGACTGTTTCCGTGCCGGAGG
AGAGCTGTGGCGTCTCATGACCGAGGACAAGAAACAGATTCTTATTGAGAATACCGCAGCCGACATTGCTCCTGTGACTG
AAAACATCAAGTATCGTCATGCCGTGCATTGTTATCATGCCGACAAGGAATACGGCGAACGGTTCACGAAAGCGGTTGGA
TTGGATTTTGCAAAGGTGATTGAGCTGTCAAAACTCTCCAACAATGATTTGAACAAGGTGACTTATCAGGAGAAGATGGA
CGCATAG

Protein sequence :
MEKDKFKKLTNEVGAPVADNENAITAGPRGPVVMQDVWLMEKMAHFNREVIPERRMHAKGWGAYGKLTVKKDISKYTKAK
VLQPGTTTDLFIRFSTVAGERGAADCERDIRGVAVKFYTEEGNWDLVGNNTPTFFIRDVHNFSDLNRAVKRDPRTGRRSA
QNNWDFWTLLPECFHQITIVMSDRGIPASFRNMHFFGEHTFSFYNAKSERVWCKFHFKTQQGIKNLSNEEATKINGMDRE
YHGKDLYDAIEREDFPKWTMYVQIMTEKQAKGHHENPFDITKVWSHKEYPLIEVGELELNRNPENYFAEVEQAAFTPAHV
VPGIGFSPDRFLQGRLFSYGDAQRYRLGVNHNLIPVNKARVETNDYHRDGSMRVDGNYGGAPAYTPNSYGVWTAQLEVSE
PPLDLEGAMYRYDPKDDPTDDCFRAGGELWRLMTEDKKQILIENTAADIAPVTENIKYRHAVHCYHADKEYGERFTKAVG
LDFAKVIELSKLSNNDLNKVTYQEKMDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 1e-135 61
katA YP_005126717.1 catalase Not tested Not named Protein 3e-91 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-86 50
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-86 50
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-86 50
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-86 50