Gene Information

Name : Spico_0246 (Spico_0246)
Accession : YP_004410861.1
Strain : Sphaerochaeta coccoides DSM 17374
Genome accession: NC_015436
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3655
EC number : -
Position : 277367 - 277567 bp
Length : 201 bp
Strand : +
Note : KEGG: bca:BCE_0370 hypothetical protein; SPTR: Cytosine-specific methyltransferase; IMG reference gene:2503956515; PFAM: Helix-turn-helix

DNA sequence : 
ATGTCGGTTAGTTATGATAAGCTATGGAAATTGCTTATAGATAAAAAGATGAACCGCACGGATTTAAAAAATGCTGCGGG
TATCAGCTTTAATGTTTTAGCTAAAATGGGCAAGGGTGAGGCTGTTTCAATGGAAAGTATGTTGAAGGTCTGTAAAGCTC
TTGATTGTGATATTTCTGATGTTATGGAGCTTGAAAAATGA

Protein sequence : 
MSVSYDKLWKLLIDKKMNRTDLKNAAGISFNVLAKMGKGEAVSMESMLKVCKALDCDISDVMELEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00700 YP_008394224.1 putative transcriptional regulator Not tested Not named Protein 7e-14 52
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 1e-10 45
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 1e-10 45
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 1e-10 45
Cp1002_1456 YP_005681720.1 hypothetical protein Not tested PiCp 5 Protein 5e-10 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spico_0246 YP_004410861.1 hypothetical protein DQ212986.1.gene3.p01 Protein 1e-13 50