Gene Information

Name : Spico_0229 (Spico_0229)
Accession : YP_004410845.1
Strain : Sphaerochaeta coccoides DSM 17374
Genome accession: NC_015436
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 256147 - 257166 bp
Length : 1020 bp
Strand : +
Note : COGs: COG0078 Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; InterPro IPR002292:IPR006132:IPR006131; KEGG: pmo:Pmob_0068 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspart

DNA sequence :
ATGAATCTTTTATCCACTTTGAAAGGACGTAGCTTCCTTACTCTCCTTGATTATTCCGCGCAGGAGATACATGCGCTCCT
TGCTCTCGCTTCTGAACTCAAGGCGCGCAAGAAGGGTTGCCCGTCCGATTTACCACGTCATCTGCTTGAAGACAAGAACA
TCGTCCTGATTTTTGACAAGACATCCACCCGCACCCGTTGTTCCTTTGAGGTGGCGGCATTTGACGAAGGCGCCAACGTG
ACGTTCCTCACCAACAGCCAGATGGGAGGAAAAGAGTCCGTCGAGGATACCGCGCGTGTCTTGGGACGGATGTACGATGG
CATAGAATACCGTGGTTTTTCCCAGAGGGTGGTGGAAAATCTTGCCGCGTACAGTGGAATCCCCGTTTTTAACGGTTTGA
CCGATGACGATCATCCTACCCAGGTGCTGGCGGATTTCCTGACTGCACAGGAGCATGTCGATAAGCCTCTTGAGGCGATG
AAACTGGTCTATGTCGGTGATGGTCGCAACAATGTCGCCAATGCCTTGTTGATTGGCGGGGCAAAGGTAGGGATGGATGT
GACTGTTTCCTCTCCGCGTGGATTGTTCCCTGATTCCGCGTTGCTTGAGAAGCTTTCTCCTATTGCCGCTGCTTCCGGTT
CCCTCTTGTCCGTAGAGGAAAATCCGTATGAGGCGGTGAAGGGGGCGGACATCATTTATACGGATGTCTGGGTCTCGATG
GGTGAGGAGGACAAGGCGCGGGAAAGGGTCGCCCTGCTCAAAGCGTATCAAGTGAATGAGGCCTTGCTTGAAGCGACGGG
AAATCCGAAGGTCATCTTTGAACATTGCCTGCCCGCTTACCATGACCGGAATACTGTTTCCGGTGCCAAGCTGTGTGATA
TCGCTGGTATGGATGCCCTGGAGGTCACGGACGATGTGTTCCGTGGAGCTCATTCTGTCGTTTTCGATGAAGCGGAGAAC
CGGATGCATACAATCAAGGCGGTGATGGTCGCGTCCTTGAGCGACAAGCTCCCTCGATGA

Protein sequence :
MNLLSTLKGRSFLTLLDYSAQEIHALLALASELKARKKGCPSDLPRHLLEDKNIVLIFDKTSTRTRCSFEVAAFDEGANV
TFLTNSQMGGKESVEDTARVLGRMYDGIEYRGFSQRVVENLAAYSGIPVFNGLTDDDHPTQVLADFLTAQEHVDKPLEAM
KLVYVGDGRNNVANALLIGGAKVGMDVTVSSPRGLFPDSALLEKLSPIAAASGSLLSVEENPYEAVKGADIIYTDVWVSM
GEEDKARERVALLKAYQVNEALLEATGNPKVIFEHCLPAYHDRNTVSGAKLCDIAGMDALEVTDDVFRGAHSVVFDEAEN
RMHTIKAVMVASLSDKLPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-90 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 58
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-89 58
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-89 58
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-90 58
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-90 58
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-89 56