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Name : Spico_0156 (Spico_0156) Accession : YP_004410776.1 Strain : Sphaerochaeta coccoides DSM 17374 Genome accession: NC_015436 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 176987 - 178321 bp Length : 1335 bp Strand : + Note : COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452:IPR001998:IPR012307; KEGG: ssm:Spirs_3786 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase 2; TIGRFAM: Xylose isomerase DNA sequence : ATGTCAGCACAGTATTTCACCGGTGACCAAGAGTTCTTCACAGGCATCGGAGCCATCCGGTTCGAGGGTCCGCGGTCGGA CAATCCCCTTGCCTTCAAGTTCTATGATCCCGCCAAGAAGATTGCCGGGAAGACTATGAAGGAACACCTGCGTTTTGCCA TCGCTTACTGGCACAGCTTCTGCGCCGACGGCGCGGATCCCTTTGGACGGGCATCCCATGATTTCCCGTGGAACCATGCG AATCCCATGACCGCCGCGCATTTGAAGGCTCAGGCGGCTTTCGAGTTCTTTACCAAGATTGGCGCTCCCTATTACTGTTT CCATGATGCCGATGTCGCTCCGGAAGGAGATAACGTGGATGAGTACCAGAAGAATTACTGGGAGATTGCCCGTATTTTCC GTACCCTCCAGGACAAGACCGGGGTGAAGCTGCTGTGGAACACGGCAAACCTGTTCTCCCATCCCCGCTACATGAACGGA GCCGCGACCAATCCTGACTTCAATGTCGTTGCCCGTGCCGCTCTCCAGATACAGACCTGCCTTGACGTGAATGTCTTTCT TGGAGGCGAAGGGTATACGTTTTGGGGCGGGCGCGAGGGATACATGAGCTTGTGGAATACCGACATGAAAAGGGAAGCCG CGCACATGGGGACTTTCCTCCGCATGGCCAGGGATTACGGACGCAGGATTGGGTTCTCCGGTGCGTATTACATTGAACCC AAGCCGATGGAGCCATCGAAACACCAGTATGACTATGATGCCGCGACATCAATCGGGTTCATCAAGGAACAGGGGCTGGA GAAGGATTTCAGGCTGAATATTGAGAACAACCATGCCACTTTGGCAGGTCATACCTTCGCCCATGAGCTTCAGGTAGCCT CTGATGCCGGGCTTCTGGGAAGCGTGGACGCCAACCAGGGTGATGCCCAGAACGGATGGGATACCGACGAGTTCCCCTGT GATGTGTACCAGACGGTCGAGGCGATGATGGTCATTCTGCGCTCCGGCGGTTTCACTACAGGCGGGCTGAACTTTGATGC CAAGCGTCGCCGCAACTCAACGGACATGGAAGACTTGTTTATTGCCCACATTTTAGGATTTGATACCTTTGCGCTCGGCC TGACGCTGGCGGACAGGATTATCTCTGATGGCGTGGTTGATGATTTGCTTGCCAAGCGGTATTCCAGCTTTGATTCCGGT TCAGGCGCTGACTTTGAGAAAGGAAAATTGACTCTCGAACAACTTGCGGGAATAGGAAAAACCGCGCCGCAGACAAAGAC AAGCGGCAAGCAGGAGTACATCCAGTCCTTGGTCAACCAATATCTGTTCGGCTAA Protein sequence : MSAQYFTGDQEFFTGIGAIRFEGPRSDNPLAFKFYDPAKKIAGKTMKEHLRFAIAYWHSFCADGADPFGRASHDFPWNHA NPMTAAHLKAQAAFEFFTKIGAPYYCFHDADVAPEGDNVDEYQKNYWEIARIFRTLQDKTGVKLLWNTANLFSHPRYMNG AATNPDFNVVARAALQIQTCLDVNVFLGGEGYTFWGGREGYMSLWNTDMKREAAHMGTFLRMARDYGRRIGFSGAYYIEP KPMEPSKHQYDYDAATSIGFIKEQGLEKDFRLNIENNHATLAGHTFAHELQVASDAGLLGSVDANQGDAQNGWDTDEFPC DVYQTVEAMMVILRSGGFTTGGLNFDAKRRRNSTDMEDLFIAHILGFDTFALGLTLADRIISDGVVDDLLAKRYSSFDSG SGADFEKGKLTLEQLAGIGKTAPQTKTSGKQEYIQSLVNQYLFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 6e-101 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 5e-101 | 52 |
