Gene Information

Name : Spico_1355 (Spico_1355)
Accession : YP_004411943.1
Strain : Sphaerochaeta coccoides DSM 17374
Genome accession: NC_015436
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1588321 - 1589007 bp
Length : 687 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cpc:Cpar_0807 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core;

DNA sequence :

ATGAGTAGAACAGTCATAAAACTCAGGGATGTACGTAAGTACTACATGGTCGGGGATTTCCTGGTCAAGGCTCTGGACGG
TGTGTCCGTGGATATCGAGAAGGGGGAGTTCACTGCTATCATGGGACCTTCCGGATCGGGGAAATCCACGATGATGAACC
TTATCGGATGTCTGGACACCCCTACCAGCGGGCATATCTATGTCGATGGAGATAACACGTCCGGCATGAACGAAGGGGAA
CTGGCGTTCCTCCGTAATAAGAAGGTCGGTTTCATATTCCAGCAGTTCAACCTGCTGGGCAAGTTGAGTGCGCTGGAGAA
TGTCATGACGCCGCTTCTCTATGCCGGGGTATCGGTGGTGGAACGTCGGGAAAGGGCGCTGGACACCCTTGACCGTGTCG
GTCTCGCTGATCGAGTGAACCATCGTCCCAATGAGTTGAGCGGTGGACAGAAGCAAAGGGTTGCCATTGCGCGAGCTTTG
GTGAATAACCCGACAATTCTTCTTGCCGATGAACCGACAGGAGCCTTGGACACTTCGACGGGCAACCAAATCATGGCTTT
GTTCGAAAAGCTGAATGATGAAGGCAATACCGTGGTGTTTGTTACCCATGACAAGGGGCTAGGCATGAGATGTCGTCGTC
AGATACACATTCGCGACGGGAAACTGGAGGATATGAATGTTATATGA

Protein sequence :

MSRTVIKLRDVRKYYMVGDFLVKALDGVSVDIEKGEFTAIMGPSGSGKSTMMNLIGCLDTPTSGHIYVDGDNTSGMNEGE
LAFLRNKKVGFIFQQFNLLGKLSALENVMTPLLYAGVSVVERRERALDTLDRVGLADRVNHRPNELSGGQKQRVAIARAL
VNNPTILLADEPTGALDTSTGNQIMALFEKLNDEGNTVVFVTHDKGLGMRCRRQIHIRDGKLEDMNVI

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	2e-30	41
cur_1502	YP_001800896.1	cell division ATP-binding protein FtsE	Not tested	Not named	Protein	4e-32	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Spico_1355	YP_004411943.1	phosphonate-transporting ATPase	NC_012469.1.7686878.	Protein	3e-56	58
Spico_1355	YP_004411943.1	phosphonate-transporting ATPase	NC_008702.1.4606598.	Protein	5e-45	48
Spico_1355	YP_004411943.1	phosphonate-transporting ATPase	CP001581.1.gene598.p	Protein	4e-41	44
Spico_1355	YP_004411943.1	phosphonate-transporting ATPase	NC_012469.1.7685735.	Protein	1e-31	42
Spico_1355	YP_004411943.1	phosphonate-transporting ATPase	CP001581.1.gene798.p	Protein	2e-38	41