Gene Information

Name : VAB18032_09340 (VAB18032_09340)
Accession : YP_004403586.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1020957 - 1022099 bp
Length : 1143 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAGTCACGGCTTCGACACGCTCGCCATCCACGCCGGCCAGGACCCGGAGGCCCGCACCGGCGCGGTGATCCCACCTAT
TTACCAGACCAGCACGTACGCCCAGGACGCCGTCGGTGCGCCCCGGCAGGGCTACGAATACAGCCGTTCCGGCAACCCGA
CCCGCGACGCGCTCCAGGAGTGCCTGGCCGCGCTGGAGGGCGGGCCGGTCGGGCTGGCCTTCGCCAGTGGCCTGGCCGCC
GAGGACGCCCTGCTGCGTACCGTCTGCGTCCCCGGTGACCACGTGGTCATCCCCGACGACGCGTACGGCGGCACCTACCG
GCTCTTCGCCAAGGTGGCCGAGCGGTGGGGCCTGTCGTACACCCCGGCGAAGGTCTCCGACCCGGACGCCGTGCGGGCCG
CGATCCGGCCCGGCAGCACCAAGATCGTCTGGTTGGAGACGCCGACCAACCCGCTGCTCGGCATCGCCGACATCGCCACC
CTCGCCTCGGTGGCGCACGACGCGGGCGCGCTGCTGGTGGTCGACAACACCTTCGCCTCGCCGTACCTGCAGCAGCCGAT
CGCCCTCGGTGCCGACGTGGTGGTCCACTCCACCACCAAGTACATCGGCGGACACTCCGATGTGGTCGGCGGTGCCCTGG
TGGCGGCCGACGCCGCGCTCGGCGAGGAACTGCGCTACCACCAGAACGCGATGGGCGCGGTCAACGGCCCGTTCGACGCC
TGGCTGACCCTGCGCGGGATCAAGACCCTCGGCGTACGGATGGACCGGCACTGCGACAACGCCGAGCGGATCGCCGGGTA
CCTGGACGGGCACGCCAAGGTGGCCCAGGTGCTCTACCCGGGGCTGCCCAGCCACCCTGGACACGAGGTCGCGGCCAAGC
AGATGCGCCGGTTCGGCGGGATGATCTCGTTCCGGGCCGCCGGCGGCGAGGAGCACGCCGTCGAGATATGCAACCGGGCC
AAGCTTTTCGTGCTCGCCGAGTCGCTCGGCGGGGTGGAATCCCTGATCGAGCACCCGGGCCGGATGACACACGCGAGTGC
TGCCGGCTCGCCGCTTGAAGTTCCCGGCGATCTCGTGCGACTGTCTGTCGGCATCGAGACGGTCGAAGACCTGCTCGCCG
ATCTGGAGCAGGCGCTGGGCTGA

Protein sequence :
MSHGFDTLAIHAGQDPEARTGAVIPPIYQTSTYAQDAVGAPRQGYEYSRSGNPTRDALQECLAALEGGPVGLAFASGLAA
EDALLRTVCVPGDHVVIPDDAYGGTYRLFAKVAERWGLSYTPAKVSDPDAVRAAIRPGSTKIVWLETPTNPLLGIADIAT
LASVAHDAGALLVVDNTFASPYLQQPIALGADVVVHSTTKYIGGHSDVVGGALVAADAALGEELRYHQNAMGAVNGPFDA
WLTLRGIKTLGVRMDRHCDNAERIAGYLDGHAKVAQVLYPGLPSHPGHEVAAKQMRRFGGMISFRAAGGEEHAVEICNRA
KLFVLAESLGGVESLIEHPGRMTHASAAGSPLEVPGDLVRLSVGIETVEDLLADLEQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-65 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-66 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-60 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_09340 YP_004403586.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 3e-59 43