Gene Information

Name : VAB18032_08730 (VAB18032_08730)
Accession : YP_004403464.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 888375 - 889805 bp
Length : 1431 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGTTCGAATACGCTCCCGCCCCCGAGTCCCGCTCGGTGGTGGACATCAAACCGTCCTACGGCCTGTTCATCGACGGCGC
GTTCGTCGATCCGGCCGACGGCGGCAGCTTCAAGTCGATCAACCCGGCCTCCGAGGAGGTGCTCAGCGAGGTCGCCGAGG
GCGGACCGCAGGACGTGGACCGCGCGGTCCGTGCCGCCCGGAAGGTGTACGAGAAGGTCTGGGGTCCGATGCCGGGCCGG
GACCGGGCCAAGTACCTGTACCGGATCGCCCGGATCATCCAGGAACGCTCCCGCGAGCTGGCCGTGCTGGAGTCCCTGGA
CAACGGCAAGCCGATCAAGGAGTCCCGGGACGTCGACCTGCCGTTGGTCGCCGCGCACTTCTTCTACTACGCCGGTTGGG
CCGACAAGCTGAACCACGCCGGCTTCGGTGCCAACCCGCAGCCGCTCGGGGTGGCCGCCCAGGTCATCCCGTGGAACTTC
CCGCTGCTGATGCTGGCCTGGAAGATCGCCCCGGCGCTGGCCGCCGGTAACACCGTGGTGCTCAAGCCGGCGGAGACCAC
CCCGCTTACCGCGCTGCTGTTCGCCGAGATCTGCCAGCAGGCCGACCTGCCGCCCGGCGTGGTCAACATCGTCACCGGTG
CCGGCGAGACCGGACGCGCGTTGGTCGAGCACGACGGCGTGGACAAGGTCGCCTTCACCGGCTCCACCGACGTCGGTCGG
GCCATCGCCCGCGCGGTCGCCGGCAGCCGCAAGAAGCTCACCCTGGAACTCGGCGGCAAGGCGGCCAACATCGTCTTCGA
CGACGCCCCGGTCGACCAGGCCGTCGAGGGCATCGTCAACGGCATCTTCTTCAACCAGGGGCACGTCTGCTGCGCCGGTT
CCCGGCTGCTGATTCAGGAGTCCGTCGCCGACCAGGTGCTGGAGTCACTCAAGCGTCGGATGGCCCAGCTGCGGGTCGGG
GACCCGCTGGACAAGAACACCGACATCGGGGCGATCAACTCGGCCGCCCAGCTGGCCCGGATCCGGGAACTGACCGAGGC
CGGGGCCGCCGAGGGCGCGCAGCAGTGGTCGCCGCCGTGCGAGCTGCCCGAACGGGGCTTCTGGTTCGCGCCGACCATCT
TCACCGGGGTCACCCAGGCACACCGGATCGCCCGCGAGGAGATCTTCGGTCCGGTGCTGTCCGTGCTGACCTTCCGCACC
CCGGCCGAGGCCGTGGAAAAGGCAAACAACACGCCGTACGGGCTGTCGGCCGGGATCTGGACCGAGAAGGGTTCCCGGAT
CCTGTGGACGGCCGACCGGCTGCGCGCCGGAGTGGTCTGGGCCAACACGTTCAACAAGTTCGACCCGACCTCGCCGTTCG
GTGGCTACAAGGAGTCGGGCTACGGCCGCGAGGGCGGTCGGCACGGGCTGGAGGCGTACCTCAATGTCTGA

Protein sequence :
MFEYAPAPESRSVVDIKPSYGLFIDGAFVDPADGGSFKSINPASEEVLSEVAEGGPQDVDRAVRAARKVYEKVWGPMPGR
DRAKYLYRIARIIQERSRELAVLESLDNGKPIKESRDVDLPLVAAHFFYYAGWADKLNHAGFGANPQPLGVAAQVIPWNF
PLLMLAWKIAPALAAGNTVVLKPAETTPLTALLFAEICQQADLPPGVVNIVTGAGETGRALVEHDGVDKVAFTGSTDVGR
AIARAVAGSRKKLTLELGGKAANIVFDDAPVDQAVEGIVNGIFFNQGHVCCAGSRLLIQESVADQVLESLKRRMAQLRVG
DPLDKNTDIGAINSAAQLARIRELTEAGAAEGAQQWSPPCELPERGFWFAPTIFTGVTQAHRIAREEIFGPVLSVLTFRT
PAEAVEKANNTPYGLSAGIWTEKGSRILWTADRLRAGVVWANTFNKFDPTSPFGGYKESGYGREGGRHGLEAYLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 3e-53 43
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 3e-53 43
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 6e-53 43
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 4e-52 42
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 4e-52 42
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 1e-52 42
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 1e-52 42
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 1e-52 42
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 7e-53 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-69 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-71 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-74 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-74 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-74 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_08730 YP_004403464.1 aldehyde dehydrogenase VFG0082 Protein 9e-72 41