Gene Information

Name : VAB18032_07905 (VAB18032_07905)
Accession : YP_004403299.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 717554 - 718249 bp
Length : 696 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGACCGGGGACGTGATCGTGCTCGACCAGGTCGGCAGGAGGTACGCCGGCGGAGTGGTCGCCCTCGCCGACGTGTCGCT
GCGGATCGGTCACGGCGAGCTGGTGGCGATCGTCGGGCCGTCCGGCTCCGGCAAGTCGACCATGCTGAACGTGATCGGCA
CGCTGGACCGGCCGACCTCGGGCACGGTGCTGATCGACGGACACGACGTTGCTCGGCTCTCCGACCGGCAGCTCTCGGCG
CTGCGGGCCACCCGGATCGGCTTCGTGTTCCAGCAGTTCCACCTGGCCCCCGGCGTACCGGTGCTCGACAACGTGGCGGA
CGGGCTGCTCTATGCCGGCGTACCCCGGCGGGAGCGGCGACGGCGGGCGGAGGCCGCGTTGCACCGCGTCGGCCTCGGGC
ACCGGCTCGGGCACCGGCCGCACGAGCTTTCCGGCGGCGAGCGGCAGCGGGTCGCGGTGGCCCGCGCGGTCGTCGGCGAG
CCGGCGGTGCTGCTGGCCGACGAACCGACCGGCAACCTGGACACCAGTTCCGGGACGGCCGTGCTCGACCTGCTGCACGG
GCTGCACCGGGCCGGGACCACGGTCGTGGTGATCACGCACGACCGGGAGATCGCCGCCGGCCTGCCCCGCCAGGTGCAGA
TGCGTGACGGGCGGCTGCGCGCCGACTCGCGGCCGGTGCCGAGCGGGGTGAGCTGA

Protein sequence :
MTGDVIVLDQVGRRYAGGVVALADVSLRIGHGELVAIVGPSGSGKSTMLNVIGTLDRPTSGTVLIDGHDVARLSDRQLSA
LRATRIGFVFQQFHLAPGVPVLDNVADGLLYAGVPRRERRRRAEAALHRVGLGHRLGHRPHELSGGERQRVAVARAVVGE
PAVLLADEPTGNLDTSSGTAVLDLLHGLHRAGTTVVVITHDREIAAGLPRQVQMRDGRLRADSRPVPSGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-23 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-17 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-08 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-09 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-09 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_07905 YP_004403299.1 hypothetical protein NC_008702.1.4606598. Protein 2e-30 50
VAB18032_07905 YP_004403299.1 hypothetical protein NC_012469.1.7686878. Protein 4e-37 48
VAB18032_07905 YP_004403299.1 hypothetical protein CP001581.1.gene798.p Protein 1e-25 43
VAB18032_07905 YP_004403299.1 hypothetical protein NC_012469.1.7686946. Protein 5e-20 41