Gene Information

Name : VAB18032_07765 (VAB18032_07765)
Accession : YP_004403273.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Unknown
Product : integrase core domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 695477 - 696211 bp
Length : 735 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
GTGCACGCGGCCTCGAACGGCACCTACGGCGCTCCCCGCATCCACGCCGAACTGGCCGCCGTCGGACGGCGGCACGGCCG
CAAACGCATCGCCCGCCGGATGCGTGAGGCCGGCGTACGCGGCAGGAGCCCACGCCGCTGGAAGACCACCACCATCGCCG
ATCCGAACGCCTGGCAGCGGCCGGATCTCGTAGAGCGGGACTTCACCGTCGATGCGACCGCGGTAGACACCCGCTGGTGC
GGCGACATCACCTACATCAACACATGGGAGGGCTGGCTCTACCTGGCCACCGTCATCGACCTGGCCTCCCGCCGCGTCGT
GGGCTGGGCGGTGGCCGACCACCTCAAGACCGACCTGGTCGACGCCGCTCTGTCCGACGCCCTGCAACGGCGCCGACCCG
CCGACGGTCTCGTCTTTCACTCCGACCGCGGCTGTCAATACACCAGCGCCCAGCACGCCCGCCTCGCCAAGCGGCACGGC
GTACGCCTGAGCGTGGGCCGGCGCGGGCAGTGCTGGGACAACGCCGTCGCCGAATCGTTCTTCTCAACCCTGAAAACGGA
ACTGATCCACCGGCAGGCATGGCCCACCCACAAAGCCGCCCAGCAGGCAACATTCGAGTACATCGAAGGCTGGTACAACA
CCCGTCGCCGGCACTCCAGCCTCGGCTACCTCAGCCCCGCCGCTTATGAAGGCGGCACCACCATCAGCCTGCTACCTGCT
CTCAAGGTAGCCTAA

Protein sequence :
MHAASNGTYGAPRIHAELAAVGRRHGRKRIARRMREAGVRGRSPRRWKTTTIADPNAWQRPDLVERDFTVDATAVDTRWC
GDITYINTWEGWLYLATVIDLASRRVVGWAVADHLKTDLVDAALSDALQRRRPADGLVFHSDRGCQYTSAQHARLAKRHG
VRLSVGRRGQCWDNAVAESFFSTLKTELIHRQAWPTHKAAQQATFEYIEGWYNTRRRHSSLGYLSPAAYEGGTTISLLPA
LKVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-37 45
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-37 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-37 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 9e-30 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-28 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-30 41
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 4e-23 41