Gene Information

Name : VAB18032_03675 (VAB18032_03675)
Accession : YP_004408417.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6494998 - 6495684 bp
Length : 687 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACCGCCATGCTGTCCCTGTCCGACGTCACCCTGATCCACGGCGACGGCGAAGACACCGTCACCGCCCTCGACAAGGT
CAACCTGGAGGTCGAGGCGGGCGAGCTGGTCGCGATCGTCGGCCCCTCCGGCGCCGGCAAGTCCAGCCTGCTGGCGGTCT
GCGGAGCGCTCATCAGCCCCACCTCGGGCACGATCCGGCTCAACGACCTGGACCTCAGCGCGCAGTCGCCGCGCCGGCTC
ACCGCGATCCGTCGGGAGCGGATCGGCTTCGTGTTCCAGAGCGGCAACCTGATCCCCTCGCTCACCAGCCTGGACCAGGT
ACGGCTGCCGCTGACCTTCGGCAAGGTCGCCAACCCGCGCGACCCCCGGGAGCTGCTGGCCGAGGTCGGCATGTCGCACA
AGGCGGACCGACGCCCGCACCAGCTCTCCGGCGGCGAACGGCAGCGGGTCGGCATCGCGCGGGCACTTGTCACCCGCCCC
CAGGTGCTCCTGGTGGACGAGCCGACCGCGGCGCTGGACCGCCAGCGCAGTCAGGACGTCGTCGCCCTGCTGGCCCGCGA
GGCGCACGAGCACGGGGTCGCCACCGTCATGGTCACCCACGACCACGAGGTGCTGCACCACTGCGACCGGGTACTTGAGA
TGATCGACGGCAGGCTGTTGCCCGCCGAGAGCAACGCCGCGGTCTGA

Protein sequence : 
MTAMLSLSDVTLIHGDGEDTVTALDKVNLEVEAGELVAIVGPSGAGKSSLLAVCGALISPTSGTIRLNDLDLSAQSPRRL
TAIRRERIGFVFQSGNLIPSLTSLDQVRLPLTFGKVANPRDPRELLAEVGMSHKADRRPHQLSGGERQRVGIARALVTRP
QVLLVDEPTAALDRQRSQDVVALLAREAHEHGVATVMVTHDHEVLHHCDRVLEMIDGRLLPAESNAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-38 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-38 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_03675 YP_004408417.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-34 44