Gene Information

Name : VAB18032_07090 (VAB18032_07090)
Accession : YP_004403142.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 544152 - 545420 bp
Length : 1269 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGTTGCATCGGATCGGCGACCTGATCCTCGAGAACGCCGACCGGCTGGCCCTGCTCGACTGTCTCGACAACGGCAAGCC
GCTGCGGGTGGCCCGGGCCGGCGACGTACCGGCCGCCGCCGCGGTGTTCCACTACATGGCCGGCTGGCCCGGCCGGTTGA
ACGGCGAGAACGCCTCGATCTACACCGGCAGCCCGGAGCGGCACCTGGCGCTGACCGTACCGGAACCGGTGGGTGTGGTG
GCCGCCATCATTCCGTGGAACTTCCCGCTCTACATGGCGGCGGCGAAGGTGGCCCCCGCCCTGGCGGCTGGCTGCACCGT
GGTGCTCAAGCCCGCCGAGCAGACGCCGCTGTCCGCCCTGGCCCTCGCGCAACTGGCCCAGGAGGCCGGTCTGCCGCCGG
GCGTGCTCAACGTCCTCACCGGCGACGCCGCCACGGGTGCGGCGCTCGCCGCGCATCCGGGCGTCGACAAGGTGACCTTC
ACCGGGTCGACGGAGGTCGGGCGCAGCATCGTCCGGGGCGCGGCCGTCGACTTCCGCCGGGTGACCCTGGAACTCGGCGG
CAAGTCACCGAACATCGTGTTCGGCGACGCCGACCTGCGGCAGGCGATCGACGGGGCGGCCCACGCGATCTTCTACAACC
AGGGTGAGACCTGCGTGGCCGGTTCCCGGCTGTACGTGCAACGGCAGGTCTTCGACGAGGTGGTCGCCGGGATCCGGGAG
CGGGCCGCGGCGATCAGGATCGGCGACGGTCTGGACCGGGACACCGAGATGGGGCCGCTGATCTCCGCGGAGCACCGCAC
CCGGGTGCTGTCCTACCTGGACTCCGCCCGGGCCGACGGGGCCCGGGTCACCGGCGGTCAGGTGCCGGACTCGCCGGGCT
TCTTCTGCACTCCGGCCGTGGTGACCGACGCCGACCCGCAGGCGCCGGTGGTCCGCGAGGAGGTGTTCGGCCCGGTGCTG
GTGGCCCAACCCTTCGACACGGTGCAGGAGGCGGTGGCGCTGGCCAACGACAGCCCGTACGGGCTCGCCGCCGGCGTGTT
CACCCGCGACCTGGGTCTGGCGCACCAGGTCGGCCGTCGACTGCGCGCCGGCACCGTGTGGATCAACAGCTGGCACGTGC
TCGATCCGGCGCTGCCCTTCGGCGGGATGCGGGGCTCGGGTTGGGGGCGGGAAATGGGCAAGGCGGGCGTCGACGCCTTT
CTCGAAACGAAAACACTGATAAATGATCTCGGCAACCGGTCGTGGGGGCCGACACCTGCTTCGAAGTGA

Protein sequence :
MLHRIGDLILENADRLALLDCLDNGKPLRVARAGDVPAAAAVFHYMAGWPGRLNGENASIYTGSPERHLALTVPEPVGVV
AAIIPWNFPLYMAAAKVAPALAAGCTVVLKPAEQTPLSALALAQLAQEAGLPPGVLNVLTGDAATGAALAAHPGVDKVTF
TGSTEVGRSIVRGAAVDFRRVTLELGGKSPNIVFGDADLRQAIDGAAHAIFYNQGETCVAGSRLYVQRQVFDEVVAGIRE
RAAAIRIGDGLDRDTEMGPLISAEHRTRVLSYLDSARADGARVTGGQVPDSPGFFCTPAVVTDADPQAPVVREEVFGPVL
VAQPFDTVQEAVALANDSPYGLAAGVFTRDLGLAHQVGRRLRAGTVWINSWHVLDPALPFGGMRGSGWGREMGKAGVDAF
LETKTLINDLGNRSWGPTPASK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-49 46
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-38 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-46 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-46 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-46 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-46 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_07090 YP_004403142.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 7e-47 41