Gene Information

Name : VAB18032_26330 (VAB18032_26330)
Accession : YP_004406964.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 4876285 - 4877643 bp
Length : 1359 bp
Strand : -
Note : COG0469 Pyruvate kinase

DNA sequence :
ATGAACGTGGCGAGGCTGAACTTCAGCCACGGCAGCCACGCCGATCACGAGGCGGTCTACCACCTGGTCCGCGAGGCATC
GGAGGCGACCGGCAAGCCGGTGGCGATCCTGGCCGACCTGCAAGGGCCGAAGATCCGGCTGGGCCGCTTCGCCGACGGCC
CGCACGAGTGGCGCACCGGCGACTCCGTGGTGATCACCGGAGACGACGTCGTGGGTAGCAAGGAGCGGGTCTCCTGCACC
TACCGCAAGCTCCCGCAGGAGGTCAAGCCCGGTGACCGGCTGCTGATCGACGACGGCCGGGTGGCCGTCGAGGTCACCGA
CGTCACCGGCAACGACATCCGGGTGCTGGTCACCGAGGGCGGGCCGGTCAGCAACAACAAGGGCGTCTCGCTGCCCAACG
TGGCGGTCAGCGTGCCGGCCCTGTCGGACAAGGACGCCGACGATCTGCGCTTCGCGCTCGGCCTCGGCGTCGACCTGGTC
GCGCTCTCCTTCGTCCGCTCCGCCGAAGACATCAAGCTCTGCCACGCGATCATGAACGAGGTCGGCGTACACCGGCCGGT
GCTGGCCAAGGTCGAGAAGCCGGAGGCGGTCGACCACCTGGAGGCCATCGTGCTGGCCTTCGACGGGGTGATGGTCGCCC
GCGGTGACCTCGGCGTGGAGTTGCCGCTGGACGAGGTGCCGCTGGTGCAGAAGCGCGCCGTGCAGCTGTGCCGGGAGAAC
GCCAAGCCGGTCATCGTGGCCACCCAGATGCTCGACTCGATGATCGAGAATTCGCGGCCCACCCGCGCCGAGGCCTCCGA
CGTCGCCAACGCGGTGCTCGACGGTGCCGACGCGGTGATGCTCTCCGGCGAGACCAGCGTGGGCAAGTACCCGGTGCTCA
CCGTCAGCACCATGGCCAAGATCGTCAGCACCACCGAGTCGGGCTCGATCGCCGTCCCCCGCCTCCAGCACGACCCGCGT
ACGCACGGTGGCGCCCTCACCGTCGCCGCGTCCTCGATCGCCCGGGCCATCGGCGCCAAGGCGCTTGTCGCCTTCTCGCA
GACCGGCGACACCGTGCGCCGGCTCAGCCGACTGCACTGCGACCTGCCGCTGCTGGCCTTCACCCCGGTTCCGGAGGTAC
GCAGCCAGCTCGCCCTCTGCTGGGGTGTGGAGACCTTCCTGATGCCGTTCGTGCAGCACACCGACGACATGTTCCGGCAG
GTCGACCAGGCGCTGCTCGGCCTCAACCGGGCCACCCCGGGCGACTACGTGGTGATCGTGGCGGGCAGCCCGCCCGGCAC
CCCCGGCTCCACCAACACCCTGCGGGTGCACCAGCTCGGTTCGCTTGTCGACGCCGCCTCGGCGCGGGCCCTGCAGTGA

Protein sequence :
MNVARLNFSHGSHADHEAVYHLVREASEATGKPVAILADLQGPKIRLGRFADGPHEWRTGDSVVITGDDVVGSKERVSCT
YRKLPQEVKPGDRLLIDDGRVAVEVTDVTGNDIRVLVTEGGPVSNNKGVSLPNVAVSVPALSDKDADDLRFALGLGVDLV
ALSFVRSAEDIKLCHAIMNEVGVHRPVLAKVEKPEAVDHLEAIVLAFDGVMVARGDLGVELPLDEVPLVQKRAVQLCREN
AKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPVLTVSTMAKIVSTTESGSIAVPRLQHDPR
THGGALTVAASSIARAIGAKALVAFSQTGDTVRRLSRLHCDLPLLAFTPVPEVRSQLALCWGVETFLMPFVQHTDDMFRQ
VDQALLGLNRATPGDYVVIVAGSPPGTPGSTNTLRVHQLGSLVDAASARALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-62 41
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 5e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_26330 YP_004406964.1 pyruvate kinase VFG0479 Protein 5e-63 41