Gene Information

Name : VAB18032_23050 (VAB18032_23050)
Accession : YP_004406310.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4125255 - 4127810 bp
Length : 2556 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGATTGGACCCGGCGACTTCGGTTCGGACCCGTGGGACGAGTTCCTGGCCCGGTACTTCGGCCGGGGCGAGGGCGGGCG
GCGGCCCGCGCACCGGGTCGACATCACCCGGCTGATGACCGCCGACGCCCGGGAGATGCTGGCCGACGCCGCACGCCGGG
CGGCGCAGAAGAAGAGCAACGACCTGGACACCGACCACCTGCTCTGGGCCGCGCTGCAACGCGAACCGCTGCGGGACCTG
GTACGCCGCGCCGGCGCGGACCCGGACACCCTGATCAACGCCCTGGGTGGGCGCGGTGACGGTGCCCCACAGGGTGAGGT
GCCGCCGAACCTGTCGTTGACCCCGGCAGCCAAGCGGGCTCTGCTGGACGCCCACCAACTGTCCCGGGCGATGGGTGCGA
ACTACATCGGCCCCGAGCACATCCTGATGGCGCTGCCGCTGAATCCGGAGTCGCCGGCCGGGCGGATGCTCGCCGCGGGC
CGGATCCAGCCGGAGTCGTTGCAGGCCGCCAACGCCGAGCGCGGCCCGATGACCAACCCGCGCCCGGATCGCGGCACCCC
CACCCTCGACCAGTACGGCCAGGATCTCACCGAGTTGGCCCGTAACGACCAGATCGACCCGGTCATCGGGCGGGCCGCCG
AGATCGAGCAGGCGGTGGAGATCCTGTCCCGGCGGACCAAGAACAACCCGGTGCTCATCGGTGAGGCCGGCGTCGGCAAG
ACCGCGATCGTGGAGGGCCTGGCCGAGCGGATCTGCGACGGTGACGTGCCGCAGACCCTGCTCGGCAAGCGGGTCATCCA
ACTCGACCTGGCCGGTCTGGTGGCCGGCACCCGCTACCGGGGCGACTTCGAGGAGCGGCTGAAGAAGGTGATCGACGAGA
TCCGGGCGCACCGGGAGGAGCTGATCATCTTCCTGGACGAGATCCACACCCTGGTCGGTGCGGGCGGCGCCGGCAGCGAG
GGCGGCATGGACGCCTCGAACATGCTCAAACCGGCCCTGGCCCGGGGCGAGTTGCGGGTGATCGGCGCGACCACCCTCGA
CGAGTACCGGCGCAGCATCGAGAAGGACGCCGCGCTGGCCCGCCGCTTCCAGCCGGTGTTCGTACCCGAGCCCAGCGTCG
AGGACACCGTGGCCATCCTGCGCGGCCTGCGCGACCGCTACGAGGCGCACCACCAGGTGCGGTTCACCGACGAGGCGCTG
GTCGCCGCCGCCGAACTCTCCGACCGCTACATCACCGACCGGTACCTGCCGGACAAGGCGATCGACCTGATCGACCAGGC
CGGCGCCCGGGTGCGGCTGCGCACCCGCACCCCCGCGGCCGACGTCCGCGACCTGGAACAGCAACTCGAAGAGGTACGCC
GGGACAAGGAGCAGGCGGTCGCCGACGAGCAGTACGAGCGCGCCTCCGCCCTGCGTGACCGGGTCGCCGAGTTGGAGGAG
CAGGTCGGCCGCGCCCGCGGCGACGAAGGCACCGGCAGCCAGGTGCCCGAGGTGGGGCCGGACGAGATCGCCGAGGTGGT
CTCCCGGGCCACCGGCATCCCCGCCAGCCAGCTCACCGAGGAGGAACGGGACCGGCTGCTGCGCCTGGAGGGCCACCTGC
ACGAGAAGGTCATCGGGCAGGACGACGCGGTCAACGCGGTCGCCGAGGCGGTACGCAGGTCGCGTACCGGGTTGGCCGAC
CCGCACCGTCCGATGGGCAGCTTCCTGTTCCTCGGGCCCACCGGCGTGGGCAAGACCGAACTGGCCCGAGCGTTGGCCGA
GGCGTTGTTCGGCGAGGCGGACCGGATGGTCCGGGTGGACATGAGCGAGTTCCAGGAACGCCACACGGTCAGCCGGCTCG
TCGGCGCCCCACCCGGCTACGTCGGGTACGAGGAGGCCGGCCAGCTCACCGAGGCGGTGCGCCGCCGCCCGTACGCGGTG
GTGCTGCTCGACGAGATCGAGAAGGCGCACCCCGACGTGTTCAACATCCTGTTGCAGGTGCTCGACGACGGGCGGCTCAC
CGACAGCCAGGGTCGGACGGTCAATTTCAAGAACACCGTCCTGATCATGACGAGCAACCTCGGCTCCGAGCTGATCACCG
GTAGTCAGCGGGCCGTCGGCTTCGGTGCCGGCGCGCCCGGCAGCGACCAGGAGAGCGACGAGCTGCGGGAACGCCTGATG
CGCCGGTTGCAGGAGAACTTCCGTCCGGAGTTCCTCAACCGCATCGACGAAGTGATCATCTTCCGGCGGTTGGAGGCCGC
GCAGCTGCGCCAGATCACCGGGCTGCTGCTGGAGGAGACCCGCCGCCGGTTGCACGCCCAGGACATCGAGGTGGACTTCA
CCACCGCCGGTGTCGACTGGCTCGCCGAGCACGGCTACCAACCGGAGTTCGGCGCCCGACCGTTGCGCCGGATCATCCAG
CGCGAGGTGGACAACCAGCTGTCCCGGATGCTGCTGGAACAGCAACTCTCCCCGGGCCAGAAGGTCACCGTCGACGCCCA
GGACGGTCAGCTCAGCTTCGACGTGTCGGCCGGGTCACGCGCCCACACGGCCGCCTCGACCACGCATCCGCGCTGA

Protein sequence :
MIGPGDFGSDPWDEFLARYFGRGEGGRRPAHRVDITRLMTADAREMLADAARRAAQKKSNDLDTDHLLWAALQREPLRDL
VRRAGADPDTLINALGGRGDGAPQGEVPPNLSLTPAAKRALLDAHQLSRAMGANYIGPEHILMALPLNPESPAGRMLAAG
RIQPESLQAANAERGPMTNPRPDRGTPTLDQYGQDLTELARNDQIDPVIGRAAEIEQAVEILSRRTKNNPVLIGEAGVGK
TAIVEGLAERICDGDVPQTLLGKRVIQLDLAGLVAGTRYRGDFEERLKKVIDEIRAHREELIIFLDEIHTLVGAGGAGSE
GGMDASNMLKPALARGELRVIGATTLDEYRRSIEKDAALARRFQPVFVPEPSVEDTVAILRGLRDRYEAHHQVRFTDEAL
VAAAELSDRYITDRYLPDKAIDLIDQAGARVRLRTRTPAADVRDLEQQLEEVRRDKEQAVADEQYERASALRDRVAELEE
QVGRARGDEGTGSQVPEVGPDEIAEVVSRATGIPASQLTEEERDRLLRLEGHLHEKVIGQDDAVNAVAEAVRRSRTGLAD
PHRPMGSFLFLGPTGVGKTELARALAEALFGEADRMVRVDMSEFQERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYAV
VLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNLGSELITGSQRAVGFGAGAPGSDQESDELRERLM
RRLQENFRPEFLNRIDEVIIFRRLEAAQLRQITGLLLEETRRRLHAQDIEVDFTTAGVDWLAEHGYQPEFGARPLRRIIQ
REVDNQLSRMLLEQQLSPGQKVTVDAQDGQLSFDVSAGSRAHTAASTTHPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-168 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_23050 YP_004406310.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 9e-180 53
VAB18032_23050 YP_004406310.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 5e-149 52